Integrating real-world data and machine learning: A framework to assess covariate importance in real-world use of alternative intravenous dosing regimens for atezolizumab.

Journal: Clinical and translational science
PMID:

Abstract

The increase in the availability of real-world data (RWD), in combination with advances in machine learning (ML) methods, provides a unique opportunity for the integration of the two to explore complex clinical pharmacology questions. Here we present a recently developed RWD/ML framework that utilizes ML algorithms to understand the influence and importance of various covariates on the use of a given dose and schedule for drugs that have multiple approved dosing regimens. To demonstrate the application of this framework, we present atezolizumab as a use case on account of its three approved alternative intravenous (IV) dosing regimens. As expected, the real-world use of atezolizumab has generally been increasing since 2016 for the 1200 mg every 3 weeks regimen and since 2019 for the 1680 mg every 4 weeks regimen. Out of the ML algorithms evaluated, XGBoost performed the best, as measured by the area under the precision-recall curve, with an emphasis on the under-sampled class given the imbalance in the data. The importance of features was measured by Shapley Additive exPlanations (SHAP) values and showed metastatic breast cancer and use of protein-bound paclitaxel as the most correlated with the use of 840 mg every 2 weeks. Although patient usage data for alternative IV dosing regimens are still maturing, these analyses provide initial insights on the use of atezolizumab and set up a framework for the re-analysis of atezolizumab (at a future data cut) as well as application to other molecules with approved alternative dosing regimens.

Authors

  • Bianca Vora
    Department of Bioengineering and Therapeutic Sciences, UCSF, San Francisco, California, United States of America.
  • Ashutosh Jindal
    Clinical Pharmacology, Genentech, Inc., South San Francisco, California, USA.
  • Erick Velasquez
    Clinical Pharmacology, Genentech, Inc., South San Francisco, California, USA.
  • James Lu
    Modeling and Simulation/Clinical Pharmacology, Genentech, South San Francisco, CA.
  • Benjamin Wu
    Department of Applied Mathematics and Statistics, Stony Brook University, Stony Brook, New York 11794, United States.