Proteomic associations with cognitive variability as measured by the Wisconsin Card Sorting Test in a healthy Thai population: A machine learning approach.

Journal: PloS one
PMID:

Abstract

Inter-individual cognitive variability, influenced by genetic and environmental factors, is crucial for understanding typical cognition and identifying early cognitive disorders. This study investigated the association between serum protein expression profiles and cognitive variability in a healthy Thai population using machine learning algorithms. We included 199 subjects, aged 20 to 70, and measured cognitive performance with the Wisconsin Card Sorting Test. Differentially expressed proteins (DEPs) were identified using label-free proteomics and analyzed with the Linear Model for Microarray Data. We discovered 213 DEPs between lower and higher cognition groups, with 155 upregulated in the lower cognition group and enriched in the IL-17 signaling pathway. Subsequent bioinformatic analysis linked these DEPs to neuroinflammation-related cognitive impairment. A random forest model classified cognitive ability groups with an accuracy of 81.5%, sensitivity of 65%, specificity of 85.9%, and an AUC of 0.79. By targeting a specific Thai cohort, this research provides novel insights into the link between neuroinflammation and cognitive performance, advancing our understanding of cognitive variability, highlighting the role of biological markers in cognitive function, and contributing to developing more accurate machine learning models for diverse populations.

Authors

  • Chen Chen
    The George Institute for Global Health, Faculty of Medicine, University of New South Wales, Sydney, NSW, Australia.
  • Bupachad Khanthiyong
    Faculty of Medicine, Bangkokthonburi University, Bangkok, Thailand.
  • Benjamard Thaweetee-Sukjai
    School of Medicine, Mae Fah Luang University, Chiang Rai, Thailand.
  • Sawanya Charoenlappanit
    National Centre for Genetic Engineering and Biotechnology, National Science and Technology Development Agency, Pathum Thani, Thailand.
  • Sittiruk Roytrakul
    Functional Ingredients and Food Innovation Research Group, National Center for Genetic Engineering and Biotechnology, National Science and Technology Development Agency, Khlong Luang, Pathum Thani 12120, Thailand.
  • Phrutthinun Surit
    Department of Biochemistry, Faculty of Medical Science, Naresuan University, Phitsanulok, Thailand.
  • Ittipon Phoungpetchara
    Department of Anatomy, Faculty of Medical Science, Naresuan University, Phitsanulok, Thailand.
  • Samur Thanoi
    School of Medical Sciences, University of Phayao, Phayao, Thailand.
  • Gavin P Reynolds
    Biomolecular Sciences Research Centre, Sheffield Hallam University, Sheffield, United Kingdom.
  • Sutisa Nudmamud-Thanoi
    Department of Anatomy, Faculty of Medical Science, Naresuan University, Phitsanulok, Thailand.