Identification of therapeutic targets for Alzheimer's Disease Treatment using bioinformatics and machine learning.

Journal: Scientific reports
Published Date:

Abstract

Alzheimer's disease (AD) is a complex neurodegenerative disorder that currently lacks effective treatment options. This study aimed to identify potential therapeutic targets for the treatment of AD using comprehensive bioinformatics methods and machine learning algorithms. By integrating differential gene expression analysis, weighted gene co-expression network analysis, Mfuzz clustering, single-cell RNA sequencing, and machine learning algorithms including LASSO regression, SVM-RFE, and random forest, five hub genes related to AD, including PLCB1, NDUFAB1, KRAS, ATP2A2, and CALM3 were identified. PLCB1, in particular, exhibited the highest diagnostic value in AD and showed significant correlation with Braak stages and neuronal expression. Furthermore, Noscapine, PX-316, and TAK-901 were selected as potential therapeutic drugs for AD based on PLCB1. This research provides a comprehensive and reliable method for the discovery of AD therapeutic targets and the construction of diagnostic models, offering important insights and directions for future AD treatment strategies and drug development.

Authors

  • ZhanQiang Xie
    Department of Thoracic Surgery, Affiliated Hospital of Guangdong Medical University, Zhanjiang, 524001, China.
  • YongLi Situ
    Department of Parasitology, Guangdong Medical University, Zhanjiang, 524023, China.
  • Li Deng
    Jingtai Technology Co. Ltd Floor 4, No. 9, Yifenghua Industrial Zone, 91 Huaning Road, Longhua District Shenzhen Guangdong Province 518109 China.
  • Meng Liang
    Department of Radiology, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, 100021, People's Republic of China.
  • Hang Ding
    The Australian E-Health Research Centre, CSIRO, Herston Brisbane.
  • Zhen Guo
    School of Civil and Hydraulic Engineering, Ningxia University, Yinchuan, China.
  • QinYing Xu
    Department of Parasitology, Guangdong Medical University, Zhanjiang, 524023, China.
  • Zhu Liang
    Tencent Youtu Lab, Shanghai, People's Republic of China.
  • Zheng Shao
    Department of Parasitology, Guangdong Medical University, Zhanjiang, 524023, China. shaozheng@gdmu.edu.cn.