A hybrid explainable model based on advanced machine learning and deep learning models for classifying brain tumors using MRI images.

Journal: Scientific reports
PMID:

Abstract

Brain tumors present a significant global health challenge, and their early detection and accurate classification are crucial for effective treatment strategies. This study presents a novel approach combining a lightweight parallel depthwise separable convolutional neural network (PDSCNN) and a hybrid ridge regression extreme learning machine (RRELM) for accurately classifying four types of brain tumors (glioma, meningioma, no tumor, and pituitary) based on MRI images. The proposed approach enhances the visibility and clarity of tumor features in MRI images by employing contrast-limited adaptive histogram equalization (CLAHE). A lightweight PDSCNN is then employed to extract relevant tumor-specific patterns while minimizing computational complexity. A hybrid RRELM model is proposed, enhancing the traditional ELM for improved classification performance. The proposed framework is compared with various state-of-the-art models in terms of classification accuracy, model parameters, and layer sizes. The proposed framework achieved remarkable average precision, recall, and accuracy values of 99.35%, 99.30%, and 99.22%, respectively, through five-fold cross-validation. The PDSCNN-RRELM outperformed the extreme learning machine model with pseudoinverse (PELM) and exhibited superior performance. The introduction of ridge regression in the ELM framework led to significant enhancements in classification performance model parameters and layer sizes compared to those of the state-of-the-art models. Additionally, the interpretability of the framework was demonstrated using Shapley Additive Explanations (SHAP), providing insights into the decision-making process and increasing confidence in real-world diagnosis.

Authors

  • Md Nahiduzzaman
    Department of Electrical & Computer Engineering, Rajshahi University of Engineering & Technology, Rajshahi 6204, Bangladesh.
  • Lway Faisal Abdulrazak
    Department of Space Technology Engineering, Electrical Engineering Technical College, Middle Technical University, Baghdad, Iraq.
  • Hafsa Binte Kibria
    Department of Electrical and Computer Engineering, Rajshahi University of Engineering and Technology, Rajshahi, 6204, Bangladesh.
  • Amith Khandakar
    Department of Electrical Engineering, Qatar University, Doha 2713, Qatar.
  • Mohamed Arselene Ayari
    Technology Innovation and Engineering Education (TIEE), College of Engineering, Qatar University, Doha 2713, Qatar, Doha, 2713, Qatar; Department of Civil and Architectural Engineering, College of Engineering, Qatar University, Doha, Qatar, Doha, 2713, Qatar. Electronic address: arslana@qu.edu.qa.
  • Md Faysal Ahamed
    Department of Computer Science & Engineering, Rajshahi University of Engineering & Technology, Rajshahi 6204, Bangladesh.
  • Mominul Ahsan
    Department of Computer Science, University of York, Deramore Lane, Heslington, York YO10 5GH, UK.
  • Julfikar Haider
    Department of Engineering, Manchester Metropolitan University, Chester St, Manchester M1 5GD, UK.
  • Mohammad Ali Moni
    Bone Biology Divisions, Garvan Institute of Medical Research, Sydney, NSW 2010, Australia; The University of Sydney, School of Medical Sciences, Faculty of Medicine & Health, NSW 2006, Australia. Electronic address: mohammad.moni@sydney.edu.au.
  • Marcin Kowalski
    Institute of Optoelectronics, Military University of Technology, Gen. S. Kaliskiego 2, Warsaw, Poland.