ExGAT: Context extended graph attention neural network.

Journal: Neural networks : the official journal of the International Neural Network Society
Published Date:

Abstract

As an essential concept in attention, context defines the overall scope under consideration. In attention-based GNNs, context becomes the set of representation nodes of graph embedding. Current approaches choose immediate neighbors of the target or its subset as the context, which limits the ability of attention to capture long-distance dependency. To address this deficiency, we propose a novel attention-based GNN framework with extended contexts. Concretely, multi-hop nodes are first selected for context expansion according to information transferability and the number of hops. Then, to reduce the computational cost and fit the graph representation learning process, two heuristic context refinement policies are designed by focusing on local graph structure. One is for the graphs with high degrees, multi-hop neighbors with fewer connections to the target are removed to acquire accurate diffused information. The other is for the graphs with low degrees or uniform degree distribution, low-transferability neighbors are dislodged to ensure the graph locality is not obscured by the global information induced by the extended context. Finally, multi-head attention is employed in the refined context. Numerical comparisons with 23 baselines demonstrate the superiority of our method. Extensive model analysis shows that extending context with the informative multi-hop neighbors properly indeed promotes the performance of attention-based GNNs.

Authors

  • Pei Quan
    School of Computer Science and Technology, University of Chinese Academy of Sciences, Beijing, 101408, China; Key Laboratory of Big Data Mining and Knowledge Management, Chinese Academy of Sciences, Beijing, 100190, China; Research Center on Fictitious Economy and Data Science, Chinese Academy of Sciences, Beijing, 100190, China. Electronic address: quanpei17@mails.ucas.ac.cn.
  • Lei Zheng
    Tianjin Medical University Cancer Institute and Hospital, National Clinical Research Center for Cancer, Key Laboratory of Cancer Prevention and Therapy, Tianjin's Clinical Research Center for Cancer, Huanhuxi Road, Hexi District, Tianjin 300060, China.
  • Wen Zhang
    Oil Crops Research Institute, Chinese Academy of Agricultural Sciences Wuhan 430062 China peiwuli@oilcrops.cn zhangqi521x@126.com +86-27-8681-2943 +86-27-8671-1839.
  • Yang Xiao
  • Lingfeng Niu
    School of Economics and Management, University of Chinese Academy of Sciences, Beijing, 100190, China. Electronic address: niulf@ucas.ac.cn.
  • Yong Shi
    Research Center on Fictitious Economy and Data Science, Chinese Academy of Sciences, Beijing 100190, China; Key Laboratory of Big Data Mining and Knowledge Management, Chinese Academy of Sciences, Beijing 100190, China; College of Information Science and Technology, University of Nebraska at Omaha, Omaha, NE 68182, USA. Electronic address: yshi@ucas.ac.cn.