Predicting visual field global and local parameters from OCT measurements using explainable machine learning.

Journal: Scientific reports
PMID:

Abstract

Glaucoma is characterised by progressive vision loss due to retinal ganglion cell deterioration, leading to gradual visual field (VF) impairment. The standard VF test may be impractical in some cases, where optical coherence tomography (OCT) can offer predictive insights into VF for multimodal diagnoses. However, predicting VF measures from OCT data remains challenging. To address this, five regression models were developed to predict VF measures from OCT, Shapley Additive exPlanations (SHAP) analysis was performed for interpretability, and a clinical software tool called OCT to VF Predictor was developed. To evaluate the models, a total of 268 glaucomatous eyes (86 early, 72 moderate, 110 advanced) and 226 normal eyes were included. The machine learning models outperformed recent OCT-based VF prediction deep learning studies, with correlation coefficients of 0.76, 0.80 and 0.76 for mean deviation, visual field index and pattern standard deviation, respectively. Introducing the pointwise normalisation and step-size concept, a mean absolute error of 2.51 dB was obtained in pointwise sensitivity prediction, and the grayscale prediction model yielded a mean structural similarity index of 77%. The SHAP-based analysis provided critical insights into the most relevant features for glaucoma diagnosis, showing promise in assisting eye care practitioners through an explainable AI tool.

Authors

  • Md Mahmudul Hasan
    Queensland University of Technology (QUT), Centre for Accident Research and Road Safety Queensland (CARRS-Q), Australia; Queensland University of Technology (QUT), Institute of Health and Biomedical Innovation (IHBI), Australia. Electronic address: mahmudul.hasan.eee.kuet@gmail.com.
  • Jack Phu
    Centre for Eye Health, School of Optometry and Vision Science, University of New South Wales, Sydney, Australia.
  • Henrietta Wang
    School of Optometry and Vision Science, University of New South Wales, Sydney, NSW, Australia.
  • Arcot Sowmya
    School of Computer Science and Engineering, UNSW Sydney, Sydney, Australia.
  • Erik Meijering
    Biomedical Imaging Group Rotterdam, Departments of Medical Informatics and Radiology, Erasmus University Medical Center, Rotterdam, the Netherlands.
  • Michael Kalloniatis
    Centre for Eye Health, and School of Optometry and Vision Science, The University of New South Wales, Kensington, Australia.