Meta-learning guidance for robust medical image synthesis: Addressing the real-world misalignment and corruptions.

Journal: Computerized medical imaging and graphics : the official journal of the Computerized Medical Imaging Society
PMID:

Abstract

Deep learning-based image synthesis for medical imaging is currently an active research topic with various clinically relevant applications. Recently, methods allowing training with misaligned data have started to emerge, yet current solution lack robustness and cannot handle other corruptions in the dataset. In this work, we propose a solution to this problem for training synthesis network for datasets affected by mis-registration, artifacts, and deformations. Our proposed method consists of three key innovations: meta-learning inspired re-weighting scheme to directly decrease the influence of corrupted instances in a mini-batch by assigning lower weights in the loss function, non-local feature-based loss function, and joint training of image synthesis network together with spatial transformer (STN)-based registration networks with specially designed regularization. Efficacy of our method is validated in a controlled synthetic scenario, as well as public dataset with such corruptions. This work introduces a new framework that may be applicable to challenging scenarios and other more difficult datasets.

Authors

  • Jaehun Lee
    Intelligence and Interaction Research Center, Korea Institute of Science and Technology, Seoul, Republic of Korea; Department of Electrical and Electronic Engineering, College of Engineering, Yonsei University, Seoul, Republic of Korea. Electronic address: ljh4959@yonsei.ac.kr.
  • Daniel Kim
    Biomedical Engineering, McCormick School of Engineering and Applied Science, Northwestern University, Evanston, Illinois.
  • Taehun Kim
    Asan Medical Institute of Convergence Science and Technology, University of Ulsan College of Medicine, Asan Medical Center, Seoul, 05505, Republic of Korea.
  • Mohammed A Al-Masni
    Department of Biomedical Engineering, College of Electronics and Information, Kyung Hee University, Yongin, Republic of Korea.
  • Yoseob Han
    Department of Bio and Brain Engineering, Korea Advanced Institute of Science & Technology (KAIST), Daejeon, Republic of Korea.
  • Dong-Hyun Kim
    Neurobiota Research Center, College of Pharmacy, Kyung Hee University, Dongdaemun-gu, Seoul 02447, Republic of Korea.
  • Kanghyun Ryu
    Department of Electrical and Electronic Engineering, Yonsei University, Seoul, Republic of Korea.