Advancing ocular gene therapy: a machine learning approach to enhance delivery, uptake and gene expression.

Journal: Drug discovery today
Published Date:

Abstract

Ocular gene therapy offers a promising approach for treating various eye diseases, centered on the process of transfection, including delivery, cellular uptake and gene expression. This study addresses anatomical and physiological barriers, such as the eyelids, tear film, conjunctiva, cornea, sclera, choroid and retina, affecting therapeutic success. A three-step machine-learning approach is proposed. The first step predicts gene delivery efficacy by integrating molecular characteristics of the ocular gene therapy product, ocular barrier properties and patient demographics. The second step predicts cellular uptake rates, analyzing product penetration and cellular interactions. The final step forecasts gene expression levels, considering factors like nucleic acid type and endosomal escape. An artificial neural network model is recommended to capture complex, nonlinear relationships, enhancing our understanding of therapeutic and biological interactions.

Authors

  • Sareh Aghajanpour
    Pharmaceutical Sciences Research Center, Hemoglobinopathy Institute, Mazandaran University of Medical Sciences, Sari, Iran.
  • Hamid Amiriara
    Department of Electrical Engineering, Faculty of Engineering and Technology, University of Mazandaran, Mazandaran, Iran.
  • Pedram Ebrahimnejad
    Pharmaceutical Sciences Research Center, Hemoglobinopathy Institute, Mazandaran University of Medical Sciences, Sari, Iran.
  • Roderick A Slavcev
    Centre for Eye and Vision Research, Unit 901-903, Building 17W, Hong Kong Science Park, Pak Shek Kok, Shatin, Hong Kong; School of Pharmacy, University of Waterloo, 10A Victoria St S, Kitchener N2G 1C5, Canada; Mediphage Bioceuticals, 661 University Avenue, Suite 1300, Toronto, ON M5G 0B7, Canada. Electronic address: roderick.slavcev@theraphage.bio.