Spiking Neural Network Models of Interaural Time Difference Extraction via a Massively Collaborative Process.

Journal: eNeuro
Published Date:

Abstract

Neuroscientists are increasingly initiating large-scale collaborations which bring together tens to hundreds of researchers. At this scale, such projects can tackle big challenges and engage diverse participants. Inspired by projects in mathematics, we set out to test the feasibility of widening access to such projects even further, by running a massively collaborative project in computational neuroscience. The key difference, with prior neuroscientific efforts, being that our entire project (code, results, and writing) was public from the outset, and that anyone could participate. To achieve this, we launched a public Git repository, with code for training spiking neural networks to solve a sound localization task via surrogate gradient descent. We then invited anyone, anywhere to use this code as a springboard for exploring questions of interest to them, and encouraged participants to share their work both asynchronously through Git and synchronously at online workshops. Our hope was that the resulting range of participants would allow us to make discoveries that a single team would have been unlikely to find. At a scientific level, our work investigated how a range of biological parameters, from time delays to membrane time constants and levels of inhibition, could impact sound localization in networks of spiking units. At a more macro-level, our project brought together researchers from multiple countries, provided hands-on research experience to early career participants and opportunities for supervision and teaching to later career participants. While our scientific results were not groundbreaking, our project demonstrates the potential for massively collaborative projects to transform neuroscience.

Authors

  • Marcus Ghosh
    Department of Electrical and Electronic Engineering, Imperial College London, London, United Kingdom.
  • Karim G Habashy
    School of Psychological Science, University of Bristol, Bristol, South West England, United Kingdom.
  • Francesco De Santis
  • Tomas Fiers
    Department of Data Analysis, Ghent University, Ghent, Belgium.
  • Dilay Fidan Erçelik
    Faculty of Brain Sciences, University College London, London, United Kingdom.
  • Balázs Mészáros
    School of Engineering and Informatics, University of Sussex, Brighton, United Kingdom.
  • Zachary Friedenberger
    Centre for Neural Dynamics and Artificial Intelligence, University of Ottawa, Ottawa, Ontario, Canada.
  • Gabriel Béna
    Imperial College London, London, UK. g.bena21@imperial.ac.uk.
  • Mingxuan Hong
    Department of Computer Science and Engineering, The Chinese University of Hong Kong, Hong Kong SAR, China.
  • Umar Abubacar
    COMBYNE lab, University of Surrey, Guildford, United Kingdom.
  • Rory T Byrne
    Department of Electrical and Electronic Engineering, Imperial College London, London, United Kingdom.
  • Juan Luis Riquelme
    Max Planck Institute for Brain Research, Frankfurt, Germany.
  • Yuhan Helena Liu
    Princeton Neuroscience Institute, Princeton University, Princeton, New Jersey.
  • Ido Aizenbud
    Edmond and Lily Safra Center for Brain Sciences (ELSC), The Hebrew University of Jerusalem, Jerusalem 91904, Israel.
  • Brendan A Bicknell
    Gatsby Computational Neuroscience Unit, University College London, London, United Kingdom.
  • Volker Bormuth
    Laboratoire Jean Perrin, Institut de Biologie Paris-Seine, CNRS, Sorbonne Université, Paris, France.
  • Alberto Antonietti
  • Dan F M Goodman
    Department of Electrical and Electronic Engineering, Imperial College London, London, UK.