Unsupervised alignment in neuroscience: Introducing a toolbox for Gromov-Wasserstein optimal transport.

Journal: Journal of neuroscience methods
Published Date:

Abstract

BACKGROUND: Understanding how sensory stimuli are represented across different brains, species, and artificial neural networks is a critical topic in neuroscience. Traditional methods for comparing these representations typically rely on supervised alignment, which assumes direct correspondence between stimuli representations across brains or models. However, it has limitations when this assumption is not valid, or when validating the assumption itself is the goal of the research.

Authors

  • Ken Takeda
    Department of Radiological Technology, School of Health Sciences, Faculty of Medicine, Tohoku University, Sendai, Japan.
  • Masaru Sasaki
    Graduate School of Arts and Science, The University of Tokyo, Meguro-ku, Tokyo, Japan.
  • Kota Abe
    Graduate School of Arts and Science, The University of Tokyo, Meguro-ku, Tokyo, Japan.
  • Masafumi Oizumi
    Graduate School of Arts and Science, The University of Tokyo, Meguro-ku, Tokyo, Japan. Electronic address: c-oizumi@g.ecc.u-tokyo.ac.jp.