Single Molecule Fluorescence Microscopy and Machine Learning for Rhesus D Antigen Classification.

Journal: Scientific reports
Published Date:

Abstract

In transfusion medicine, the identification of the Rhesus D type is important to prevent anti-D immunisation in Rhesus D negative recipients. In particular, the detection of the very low expressed DEL phenotype is crucial and hence constitutes the bottleneck of standard immunohaematology. The current method of choice, adsorption-elution, does not provide unambiguous results. We have developed a complementary method of high sensitivity that allows reliable identification of D antigen expression. Here, we present a workflow composed of high-resolution fluorescence microscopy, image processing, and machine learning that - for the first time - enables the identification of even small amounts of D antigen on the cellular level. The high sensitivity of our technique captures the full range of D antigen expression (including D+, weak D, DEL, D-), allows automated population analyses, and results in classification test accuracies of up to 96%, even for very low expressed phenotypes.

Authors

  • Daniela M Borgmann
    University of Applied Sciences Upper Austria, School of Informatics, Communications and Media, Softwarepark 11, 4232 Hagenberg, Austria.
  • Sandra Mayr
    University of Applied Sciences Upper Austria, School of Applied Health and Social Sciences, Garnisonstrasse 21, 4020 Linz, Austria.
  • Helene Polin
    Red Cross Transfusion Service for Upper Austria, Krankenhausstrasse 7, 4020 Linz, Austria.
  • Susanne Schaller
    University of Applied Sciences Upper Austria, School of Informatics, Communications and Media, Softwarepark 11, 4232 Hagenberg, Austria.
  • Viktoria Dorfer
    University of Applied Sciences Upper Austria, School of Informatics, Communications and Media, Softwarepark 11, 4232 Hagenberg, Austria.
  • Lisa Obritzberger
    University of Applied Sciences Upper Austria, School of Informatics, Communications and Media, Softwarepark 11, 4232 Hagenberg, Austria.
  • Tanja Endmayr
    University of Applied Sciences Upper Austria, School of Applied Health and Social Sciences, Garnisonstrasse 21, 4020 Linz, Austria.
  • Christian Gabriel
    Red Cross Transfusion Service for Upper Austria, Krankenhausstrasse 7, 4020 Linz, Austria.
  • Stephan M Winkler
    University of Applied Sciences Upper Austria, School of Informatics, Communications and Media, Softwarepark 11, 4232 Hagenberg, Austria.
  • Jaroslaw Jacak
    University of Applied Sciences Upper Austria, School of Applied Health and Social Sciences, Garnisonstrasse 21, 4020 Linz, Austria.