AIMC Topic: Phenotype

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Morphological traits and machine learning for genetic lineage prediction of two reef-building corals.

PloS one Jun 18, 2025
Integrating multiple lines of evidence that support molecular taxonomy analysis has proven to be a robust method for species delimitation in scleractinian corals. However, morphology often conflicts with genetic approaches due to high phenotypic plas...
Coral Reefs Anthozoa Machine Learning Phenotype Animals Phylogeny
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Generative prediction of causal gene sets responsible for complex traits.

Proceedings of the National Academy of Sciences of the United States of America Jun 12, 2025
The relationship between genotype and phenotype remains an outstanding question for organism-level traits because these traits are generally . The challenge arises from complex traits being determined by a combination of multiple genes (or loci), whi...
Machine Learning Models, Genetic Phenotype Humans Transcriptome Quantitative Trait Loci Gene Expression Profiling Genome-Wide Association Study Multifactorial Inheritance Genotype
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Toward a general framework for AI-enabled prediction in crop improvement.

TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik Jun 12, 2025
A theoretical framework for AI and ensembled prediction for crop improvement is introduced and demonstrated using the logistic map. Symbolic/sub-symbolic AI-based prediction can increase predictive skill with increase in system complexity. The curse ...
Crops, Agricultural Plant Breeding Artificial Intelligence Phenotype Models, Genetic Bayes Theorem
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Generative AI for predictive breeding: hopes and caveats.

TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik Jun 11, 2025
Among the broad area of artificial intelligence (AI), generative AI algorithms have emerged as a revolutionary technology able to produce highly realistic 'synthetic' data, akin to standard simulation but with fewer contraints. The main focus of gene...
Genotype Models, Genetic Plant Breeding Algorithms Phenotype Computer Simulation Artificial Intelligence
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In situ foliar augmentation of multiple species for optical phenotyping and bioengineering using soft robotics.

Science robotics Jun 11, 2025
Precision agriculture aims to increase crop yield while reducing the use of harmful chemicals, such as pesticides and excess fertilizer, using minimal, tailored interventions. However, these strategies are limited by factors such as sensor quality, w...
Phenotype Nanoparticles Agriculture Bioengineering Equipment Design Agrobacterium tumefaciens Plant Leaves Hydrogels Robotics Plants, Genetically Modified
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What does evolution make? Learning in living lineages and machines.

Trends in genetics : TIG Jun 10, 2025
How does genomic information unfold, to give rise to self-constructing living organisms with problem-solving capacities at all levels of organization? We review recent progress that unifies work in developmental genetics and machine learning (ML) to ...
Animals Evolution, Molecular Developmental Biology Genome Biological Evolution Humans Machine Learning Phenotype
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PhenoDP: leveraging deep learning for phenotype-based case reporting, disease ranking, and symptom recommendation.

Genome medicine Jun 6, 2025
BACKGROUND: Current phenotype-based diagnostic tools often struggle with accurate disease prioritization due to incomplete phenotypic data and the complexity of rare disease presentations. Additionally, they lack the ability to generate patient-cente...
Phenotype Humans Deep Learning Software
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Epistasis regulates genetic control of cardiac hypertrophy.

Nature cardiovascular research Jun 5, 2025
Although genetic variant effects often interact nonadditively, strategies to uncover epistasis remain in their infancy. Here we develop low-signal signed iterative random forests to elucidate the complex genetic architecture of cardiac hypertrophy, u...
Aged Male Middle Aged Phenotype Female Genetic Predisposition to Disease Magnetic Resonance Imaging Receptor, IGF Type 1 Deep Learning Genome-Wide Association Study Gene Regulatory Networks Humans Induced Pluripotent Stem Cells Connectin Heart Failure Ventricular Remodeling Myocytes, Cardiac Hypertrophy, Left Ventricular Epistasis, Genetic
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Powdery mildew resistance prediction in Barley (Hordeum Vulgare L) with emphasis on machine learning approaches.

Scientific reports Jun 4, 2025
By employing machine-learning models, this study utilizes agronomical and molecular features to predict powdery mildew disease resistance in Barley (Hordeum Vulgare L). A 130-line F8-F9 barley population caused Badia and Kavir to grow at the Gonbad K...
Ascomycota Disease Resistance Neural Networks, Computer Bayes Theorem Machine Learning Plant Diseases Algorithms Hordeum Phenotype
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Predicting genetic merit in Harnali sheep using machine learning techniques.

Tropical animal health and production Jun 3, 2025
Machine learning techniques offer promising avenues for enhancing animal breeding programs by leveraging genomic and phenotypic data to predict valuable traits accurately. In this study, we evaluated seven machine learning algorithms viz., K-nearest ...
Sheep, Domestic Machine Learning Algorithms Bayes Theorem Phenotype Female Breeding Animals Pedigree Male
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