An interactive medical image segmentation framework using iterative refinement.

Journal: Computers in biology and medicine
PMID:

Abstract

Segmentation is often performed on medical images for identifying diseases in clinical evaluation. Hence it has become one of the major research areas. Conventional image segmentation techniques are unable to provide satisfactory segmentation results for medical images as they contain irregularities. They need to be pre-processed before segmentation. In order to obtain the most suitable method for medical image segmentation, we propose MIST (Medical Image Segmentation Tool), a two stage algorithm. The first stage automatically generates a binary marker image of the region of interest using mathematical morphology. This marker serves as the mask image for the second stage which uses GrabCut to yield an efficient segmented result. The obtained result can be further refined by user interaction, which can be done using the proposed Graphical User Interface (GUI). Experimental results show that the proposed method is accurate and provides satisfactory segmentation results with minimum user interaction on medical as well as natural images.

Authors

  • Pratik Kalshetti
    Department of Computer Science and Engineering, Indian Institute of Technology Jodhpur, Jodhpur 342011, Rajasthan, India. Electronic address: pmkalshetti@gmail.com.
  • Manas Bundele
    Department of Computer Science and Engineering, Indian Institute of Technology Jodhpur, Jodhpur 342011, Rajasthan, India. Electronic address: manasbundele03@gmail.com.
  • Parag Rahangdale
    Department of Computer Science and Engineering, Indian Institute of Technology Jodhpur, Jodhpur 342011, Rajasthan, India. Electronic address: parag.m.rahangdale@gmail.com.
  • Dinesh Jangra
    Department of Computer Science and Engineering, Indian Institute of Technology Jodhpur, Jodhpur 342011, Rajasthan, India. Electronic address: dineshkj13@gmail.com.
  • Chiranjoy Chattopadhyay
    Department of Computer Science and Engineering, Indian Institute of Technology Jodhpur, Jodhpur 342011, Rajasthan, India. Electronic address: chiranjoy@iitj.ac.in.
  • Gaurav Harit
    Department of Computer Science and Engineering, Indian Institute of Technology Jodhpur, Jodhpur 342011, Rajasthan, India. Electronic address: gharit@iitj.ac.in.
  • Abhay Elhence
    Department of Orthopaedics, All India Institute of Medical Sciences, Jodhpur 342005, Rajasthan, India. Electronic address: elhencea@aiimsjodhpur.edu.in.