NMR-STAR: comprehensive ontology for representing, archiving and exchanging data from nuclear magnetic resonance spectroscopic experiments.

Journal: Journal of biomolecular NMR
Published Date: Dec 22, 2018

Abstract

The growth of the biological nuclear magnetic resonance (NMR) field and the development of new experimental technology have mandated the revision and enlargement of the NMR-STAR ontology used to represent experiments, spectral and derived data, and supporting metadata. We present here a brief description of the NMR-STAR ontology and software tools for manipulating NMR-STAR data files, editing the files, extracting selected data, and creating data visualizations. Detailed information on these is accessible from the links provided.

Authors

  • Eldon L Ulrich
    Department of Biochemistry, University of Wisconsin-Madison, Madison, WI, 53706, USA.
  • Kumaran Baskaran
    Biochemistry Department, University of Wisconsin-Madison, Madison, WI, 53706, USA.
  • Hesam Dashti
    Biochemistry Department, University of Wisconsin-Madison, Madison, WI, 53706, USA.
  • Yannis E Ioannidis
    Department of Informatics & Telecommunications, University of Athens, Athens, Greece.
  • Miron Livny
    Department of Computer Sciences, University of Wisconsin-Madison, Madison, WI, 53706, USA.
  • Pedro R Romero
    Biochemistry Department, University of Wisconsin-Madison, Madison, WI, 53706, USA.
  • Dimitri Maziuk
    Biochemistry Department, University of Wisconsin-Madison, Madison, WI, 53706, USA.
  • Jonathan R Wedell
    Biochemistry Department, University of Wisconsin-Madison, Madison, WI, 53706, USA.
  • Hongyang Yao
    Biochemistry Department, University of Wisconsin-Madison, Madison, WI, 53706, USA.
  • Hamid R Eghbalnia
    Biochemistry Department, University of Wisconsin-Madison, Madison, WI, 53706, USA.
  • Jeffrey C Hoch
    Department of Molecular Biology and Biophysics, UConn Health, 263 Farmington Avenue, Farmington, CT, 06030, USA.
  • John L Markley
    Department of Biochemistry, University of Wisconsin-Madison, Madison, WI, 53706, USA.

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