Comparing Deep Learning Models for Multi-cell Classification in Liquid- based Cervical Cytology Image.

Journal: AMIA ... Annual Symposium proceedings. AMIA Symposium
Published Date:

Abstract

Liquid-based cytology (LBC) is a reliable automated technique for the screening of Papanicolaou (Pap) smear data. It is an effective technique for collecting a majority of the cervical cells and aiding cytopathologists in locating abnormal cells. Most methods published in the research literature rely on accurate cell segmentation as a prior, which remains challenging due to a variety of factors, e.g., stain consistency, presence of clustered cells, etc. We propose a method for automatic classification of cervical slide images through generation of labeled cervical patch data and extracting deep hierarchical features by fine-tuning convolution neural networks, as well as a novel graph-based cell detection approach for cellular level evaluation. The results show that the proposed pipeline can classify images of both single cell and overlapping cells. The VGG-19 model is found to be the best at classifying the cervical cytology patch data with 95 % accuracy under precision-recall curve.

Authors

  • Sudhir Sornapudi
    Missouri University of Science and Technology, Rolla, MO, USA.
  • Gregory T Brown
    Lister Hill National Center for Biomedical Communications, U.S. National Library of Medicine, Bethesda, MD, USA.
  • Zhiyun Xue
    Computational Health Research Branch, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA.
  • Rodney Long
  • Lisa Allen
    Diagnostic Systems Women's Health and Cancer, Becton Dickinson and Company, Durham, NC, USA.
  • Sameer Antani
    Computational Health Research Branch, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA.