genoDraw: A Web Tool for Developing Pedigree Diagrams Using the Standardized Human Pedigree Nomenclature Integrated with Biomedical Vocabularies.

Journal: AMIA ... Annual Symposium proceedings. AMIA Symposium
Published Date:

Abstract

The integration of genetic information in current clinical routine has raised a need for tools to exploit family genetic knowledge. On the clinical side, an application for managing and visualizing pedigree diagrams could provide genetics specialists with an integrated environment with potential positive impact on their current practice. This article presents a web tool (genoDraw) that provides clinical practitioners with the ability to create, maintain and visualize patients' and their families' information in the form of pedigree diagrams. genoDraw implements a graph-based three-step process for generating diagrams according to a de facto standard in the area and clinical terminologies. It also complies with five characteristics identified as indispensable for the next-generation of pedigree drawing software: comprehensiveness, data-drivenness, automation, interactivity and compatibility with biomedical vocabularies. The platform was implemented and tested, confirming its potential interest to clinical routine.

Authors

  • Luciano Garcia-Giordano
    Biomedical Informatics Group, DIA & DLSIIS, ETSI Informáticos, Universidad Politécnica de Madrid, Boadilla del Monte, Spain.
  • Sergio Paraiso-Medina
    Biomedical Informatics Group, Universidad Politécnica de Madrid, Madrid, Spain.
  • Raul Alonso-Calvo
    Biomedical Informatics Group, Universidad Politécnica de Madrid, Madrid, Spain.
  • Francisco Javier Fernández-Martínez
    Genetics and Inheritance Research Group, Instituto de Investigación Hospital Universitario 12 de Octubre (i+12), Madrid, Spain.
  • Victor Maojo
    Biomedical Informatics Group, DIA & DLSIIS, ETSI Informáticos, Universidad Politécnica de Madrid, Boadilla del Monte, Spain.