Hierarchical Organization of Functional Brain Networks Revealed by Hybrid Spatiotemporal Deep Learning.

Journal: Brain connectivity
Published Date:

Abstract

Hierarchical organization of brain function has been an established concept in the neuroscience field for a long time, however, it has been rarely demonstrated how such hierarchical macroscale functional networks are actually organized in the human brain. In this study, to answer this question, we propose a novel methodology to provide an evidence of hierarchical organization of functional brain networks. This article introduces the hybrid spatiotemporal deep learning (HSDL), by jointly using deep belief networks (DBNs) and deep least absolute shrinkage and selection operator (LASSO) to reveal the temporal hierarchical features and spatial hierarchical maps of brain networks based on the Human Connectome Project 900 functional magnetic resonance imaging (fMRI) data sets. Briefly, the key idea of HSDL is to extract the weights between two adjacent layers of DBNs, which are then treated as the hierarchical dictionaries for deep LASSO to identify the corresponding hierarchical spatial maps. Our results demonstrate that both spatial and temporal aspects of dozens of functional networks exhibit multiscale properties that can be well characterized and interpreted based on existing computational tools and neuroscience knowledge. Our proposed novel hybrid deep model is used to provide the first insightful opportunity to reveal the potential hierarchical organization of time series and functional brain networks, using task-based fMRI signals of human brain.

Authors

  • Wei Zhang
    The First Affiliated Hospital of Nanchang University, Nanchang, China.
  • Shijie Zhao
  • Xintao Hu
  • Qinglin Dong
  • Heng Huang
    Department of Electrical and Computer Engineering, University of Pittsburgh, Pittsburgh, USA.
  • Shu Zhang
    State University of New York, Department of Radiology, Stony Brook, New York, United States.
  • Yu Zhao
    College of Agriculture, Shanxi Agricultural University, Taigu, Shanxi, China.
  • Haixing Dai
    School of Computing, University of Georgia, Athens, GA, United States.
  • Fangfei Ge
    Cortical Architecture Imaging and Discovery Lab, Department of Computer Science and Bioimaging Research Center, The University of Georgia, Athens, GA, USA; School of Automation, Northwestern Polytechnical University, Xi'an, PR China.
  • Lei Guo
    Shanghai Mental Health Center, Shanghai Jiao Tong University School of Medicine, Shanghai, China.
  • Tianming Liu
    School of Computing, University of Georgia, Athens, GA, United States.