TooT-T: discrimination of transport proteins from non-transport proteins.

Journal: BMC bioinformatics
Published Date:

Abstract

BACKGROUND: Membrane transport proteins (transporters) play an essential role in every living cell by transporting hydrophilic molecules across the hydrophobic membranes. While the sequences of many membrane proteins are known, their structure and function is still not well characterized and understood, owing to the immense effort needed to characterize them. Therefore, there is a need for advanced computational techniques takes sequence information alone to distinguish membrane transporter proteins; this can then be used to direct new experiments and give a hint about the function of a protein.

Authors

  • Munira Alballa
    Department of Computer Science and Software Engineering, Concordia University, Montréal, Québec, Canada. m_alball@encs.concordia.ca.
  • Gregory Butler
    Department of Computer Science and Software Engineering, Concordia University, Montréal, Québec, Canada.