Development of deep learning algorithms for predicting blastocyst formation and quality by time-lapse monitoring.

Journal: Communications biology
PMID:

Abstract

Approaches to reliably predict the developmental potential of embryos and select suitable embryos for blastocyst culture are needed. The development of time-lapse monitoring (TLM) and artificial intelligence (AI) may help solve this problem. Here, we report deep learning models that can accurately predict blastocyst formation and usable blastocysts using TLM videos of the embryo's first three days. The DenseNet201 network, focal loss, long short-term memory (LSTM) network and gradient boosting classifier were mainly employed, and video preparation algorithms, spatial stream and temporal stream models were developed into ensemble prediction models called STEM and STEM. STEM exhibited 78.2% accuracy and 0.82 AUC in predicting blastocyst formation, and STEM achieved 71.9% accuracy and 0.79 AUC in predicting usable blastocysts. We believe the models are beneficial for blastocyst formation prediction and embryo selection in clinical practice, and our modeling methods will provide valuable information for analyzing medical videos with continuous appearance variation.

Authors

  • Qiuyue Liao
    Department of Gynecology and Obstetrics, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, Hubei, China.
  • Qi Zhang
    Department of Gastroenterology, The Affiliated Hospital of Qingdao University, Qingdao, China.
  • Xue Feng
    Department of Radiology and Medical Imaging, University of Virginia, Charlottesville, Virginia.
  • Haibo Huang
    Shanghai Institute for Advanced Communication and Data Science, Shanghai University, Shanghai, China.
  • Haohao Xu
    Shanghai Institute for Advanced Communication and Data Science, Shanghai University, Shanghai, China.
  • Baoyuan Tian
    Shanghai Institute for Advanced Communication and Data Science, Shanghai University, Shanghai, China.
  • Jihao Liu
    Shanghai Institute for Advanced Communication and Data Science, Shanghai University, Shanghai, China.
  • Qihui Yu
    Shanghai Institute for Advanced Communication and Data Science, Shanghai University, Shanghai, China.
  • Na Guo
    Key Laboratory of Forest Plant Ecology, Ministry of Education, Northeast Forestry University, 150040 Harbin, China. guona_910817@163.com.
  • Qun Liu
    Department of Burn and Plastic Surgery, the Fourth Hospital of Tianjin, Tianjin 300222, China; Email: 1502831499@qq.com.
  • Bo Huang
    Geriatrics Division, Department of Medicine, Peking University First Hospital, Beijing 100034, China.
  • Ding Ma
    Department of Obstetrics and Gynaecology, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, Hubei 430030, China.
  • Jihui Ai
    Department of Gynecology and Obstetrics, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, Hubei, China. jihuiai@tjh.tjmu.edu.cn.
  • Shugong Xu
    Shanghai Institute for Advanced Communication and Data Science, Shanghai University, Shanghai, China. shugong@shu.edu.cn.
  • Kezhen Li
    Department of Gynecology and Obstetrics, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, Hubei, China. tjkeke@126.com.