Antibiofilm Activity of α-Amylase from Bacillus subtilis and Prediction of the Optimized Conditions for Biofilm Removal by Response Surface Methodology (RSM) and Artificial Neural Network (ANN).

Journal: Applied biochemistry and biotechnology
PMID:

Abstract

α-amylase is known to have antibiofilm activity against biofilms of both Gram positive and Gram-negative bacterial strains. Partially purified α-amylase from Bacillus subtilis was found to have inhibit biofilm formed by P. aeruginosa and S. aureus. The spectrophotometric and microscopic studies revealed that the antibiofilm efficacy of the working strain is greater than commercially purchased α-amylase. Response surface methodology (RSM) and artificial neural network (ANN) help to predict the optimum conditions [pH 8, treatment time 6 h and enzyme concentration (200 µg/mL)] for maximum biofilm eradication. This was confirmed by several in vitro experiments. Molecular docking interactions of α-amylase with the extracellular polymeric substances (EPS) of both P. aeruginosa and S. aureus indicate towards the existence of an efficient energy driven spontaneous process. Thus, this study highlights a combination of experimental and computational approach showing the naturally extracted α-amylase from B. subtilis having the potency of removing the biofilms of harmful bacterial strains involved in causing various nosocomial infections.

Authors

  • Dibyajit Lahiri
    Department of Biotechnology, University of Engineering & Management, Kolkata, India.
  • Moupriya Nag
    Department of Biotechnology, University of Engineering & Management, Kolkata, India.
  • Tanmay Sarkar
    Department of Food Technology & Biochemical Engineering, Jadavpur University, Kolkata, India.
  • Bandita Dutta
    Department of Biotechnology, Maulana Abul Kalam Azad University of Technology, Haringhata, West Bengal, India.
  • Rina Rani Ray
    Department of Biotechnology, Maulana Abul Kalam Azad University of Technology, Nadia, West Bengal, India School of Life Sciences, Sambalpur University, Burla, Odisha, India.