A deep learning model to detect pancreatic ductal adenocarcinoma on endoscopic ultrasound-guided fine-needle biopsy.

Journal: Scientific reports
Published Date:

Abstract

Histopathological diagnosis of pancreatic ductal adenocarcinoma (PDAC) on endoscopic ultrasonography-guided fine-needle biopsy (EUS-FNB) specimens has become the mainstay of preoperative pathological diagnosis. However, on EUS-FNB specimens, accurate histopathological evaluation is difficult due to low specimen volume with isolated cancer cells and high contamination of blood, inflammatory and digestive tract cells. In this study, we performed annotations for training sets by expert pancreatic pathologists and trained a deep learning model to assess PDAC on EUS-FNB of the pancreas in histopathological whole-slide images. We obtained a high receiver operator curve area under the curve of 0.984, accuracy of 0.9417, sensitivity of 0.9302 and specificity of 0.9706. Our model was able to accurately detect difficult cases of isolated and low volume cancer cells. If adopted as a supportive system in routine diagnosis of pancreatic EUS-FNB specimens, our model has the potential to aid pathologists diagnose difficult cases.

Authors

  • Yoshiki Naito
    Department of Pathology, Kurume University School of Medicine, Kurume, 830-0011, Japan. nyoshiki@med.kurume-u.ac.jp.
  • Masayuki Tsuneki
    Medmain Research, Medmain Inc., Fukuoka, 810-0042, Japan. tsuneki@medmain.com.
  • Noriyoshi Fukushima
    Department of Pathology, Jichi Medical University, Shimotsuke, Tochigi, 329-0498, Japan.
  • Yutaka Koga
    Department of Anatomic Pathology, Graduate School of Medical Sciences, Kyushu University, Fukuoka, 812-8582, Japan.
  • Michiyo Higashi
    Department of Pathology, Graduate School of Medical and Dental Sciences, Kagoshima University, Kagoshima, Japan. east@m2.kufm.kagoshima-u.ac.jp.
  • Kenji Notohara
    Department of Anatomic Pathology, Kurashiki Central Hospital, Kurashiki, 710-8602, Japan.
  • Shinichi Aishima
    Department of Pathology and Microbiology, Saga University, Saga, 849-8501, Japan.
  • Nobuyuki Ohike
    Department of Pathology, Shizuoka Cancer Center, Shizuoka, 411-8777, Japan.
  • Takuma Tajiri
    Department of Pathology, Tokai University Hachioji Hospital, Tokyo, 192-0032, Japan.
  • Hiroshi Yamaguchi
    Department of Pathology, Saitama Medical University, Saitama, 350-0495, Japan.
  • Yuki Fukumura
    Department of Human Pathology, School of Medicine, Juntendo University, Tokyo, 113-8421, Japan.
  • Motohiro Kojima
    Division of Pathology, Exploratory Oncology Research and Clinical Trial Center, National Cancer Center, Kashiwa, 277-8577, Japan.
  • Kenichi Hirabayashi
    Department of Diagnostic Pathology, Faculty of Medicine Academic Assembly, University of Toyama Toyama Japan.
  • Yoshihiro Hamada
    Department of Pathology, Faculty of Medicine, Fukuoka University, Fukuoka, 814-0180, Japan.
  • Tomoko Norose
    Department of Pathology, Shizuoka Cancer Center, Shizuoka, 411-8777, Japan.
  • Keita Kai
    Department of Pathology, Saga University Hospital, Saga, 849-8501, Japan.
  • Yuko Omori
    Department of Investigative Pathology, Tohoku University Graduate School of Medicine, Sendai, 980-8575, Japan.
  • Aoi Sukeda
    Department of Anatomic Pathology, Tokyo Medical University, Tokyo, 160-0023, Japan.
  • Hirotsugu Noguchi
    Department of Pathology, Research Field in Medicine and Health Sciences, Medical and Dental Sciences Area, Research and Education Assembly, Kagoshima University, Sakuragoaka, 890-8544, Japan.
  • Kaori Uchino
    Department of Anatomic Pathology, Kurashiki Central Hospital, Kurashiki, 710-8602, Japan.
  • Junya Itakura
    Department of Anatomic Pathology, Kurashiki Central Hospital, Kurashiki, 710-8602, Japan.
  • Yoshinobu Okabe
    Division of Gastroenterology, Department of Medicine, Kurume University School of Medicine, Kurume, 830-0011, Japan.
  • Yuichi Yamada
    Department of Anatomic Pathology, Graduate School of Medical Sciences, Kyushu University, Fukuoka, 812-8582, Japan.
  • Jun Akiba
    Department of Diagnostic Pathology, Kurume University Hospital, Kurume, 830-0011, Japan.
  • Fahdi Kanavati
    Medmain Research, Medmain Inc., Fukuoka, 810-0042, Japan.
  • Yoshinao Oda
    Department of Anatomic Pathology, Graduate School of Medical Sciences, Kyushu University, Fukuoka, 812-8582, Japan.
  • Toru Furukawa
    Department of Investigative Pathology, Tohoku University Graduate School of Medicine, Sendai, 980-8575, Japan.
  • Hirohisa Yano
    Department of Pathology, Kurume University School of Medicine, Kurume, 830-0011, Japan.