3D-PulCNN: Pulmonary cancer classification from hyperspectral images using convolution combination unit based CNN.

Journal: Journal of biophotonics
Published Date:

Abstract

Pulmonary cancer is one of the most common malignancies worldwide. Accurate classification of its subtypes is required in differential diagnosis. However, existing algorithms are mostly based on color images, and the improvement of accuracy is quite challenging. In this study, we propose a convolution combination unit (CCU)-based three-dimensional convolutional neural network (3D-PulCNN) for classifying pulmonary cancer presented in microscopic hyperspectral image with both spatial and spectral information. CCU is designed to fuse the features acquired by different convolution scales. Compared with VGGNet, only two fully connected layers are used in this model, reducing the network parameters and model complexity. Experimental results show that 3D-PulCNN achieves overall average (OA) of 0.962 and Precision, Recall, and Kappa of more than 0.920, superior to 2D-VGGNet. Then, 3D-UNet is leveraged to segment cancer cells, and their morphological characteristics are calculated to supply quantitative virtual analysis data for classification results explanation and prognosis assessment.

Authors

  • Qing Zhang
    Department of Respiratory Medicine, Affiliated Zhongshan Hospital of Dalian University, Dalian, China.
  • Yan Wang
    College of Animal Science and Technology, Beijing University of Agriculture, Beijing, China.
  • Song Qiu
    Shanghai Key Laboratory of Multidimensional Information Processing, East China Normal University, Shanghai, China.
  • Jiangang Chen
  • Li Sun
    Icahn School of Medicine at Mount Sinai, New York, NY, USA.
  • Qingli Li