Random survival forests for dynamic predictions of a time-to-event outcome using a longitudinal biomarker.

Journal: BMC medical research methodology
Published Date:

Abstract

BACKGROUND: Risk prediction models for time-to-event outcomes play a vital role in personalized decision-making. A patient's biomarker values, such as medical lab results, are often measured over time but traditional prediction models ignore their longitudinal nature, using only baseline information. Dynamic prediction incorporates longitudinal information to produce updated survival predictions during follow-up. Existing methods for dynamic prediction include joint modeling, which often suffers from computational complexity and poor performance under misspecification, and landmarking, which has a straightforward implementation but typically relies on a proportional hazards model. Random survival forests (RSF), a machine learning algorithm for time-to-event outcomes, can capture complex relationships between the predictors and survival without requiring prior specification and has been shown to have superior predictive performance.

Authors

  • Kaci L Pickett
    Department of Pediatrics, University of Colorado Anschutz Medical Campus, Aurora, 80045, Colorado, USA.
  • Krithika Suresh
    Department of Biostatistics and Informatics, University of Colorado Anschutz Medical Campus, Aurora, 80045, Colorado, USA. krithika.suresh@cuanschutz.edu.
  • Kristen R Campbell
    Department of Pediatrics, University of Colorado Anschutz Medical Campus, Aurora, 80045, Colorado, USA.
  • Scott Davis
    Division of Renal Diseases and Hypertension, University of Colorado Anschutz Medical Campus, Aurora, 80045, Colorado, USA.
  • Elizabeth Juarez-Colunga
    Department of Pediatrics, University of Colorado Anschutz Medical Campus, Aurora, 80045, Colorado, USA.