Automatic improvement of deep learning-based cell segmentation in time-lapse microscopy by neural architecture search.

Journal: Bioinformatics (Oxford, England)
Published Date:

Abstract

MOTIVATION: Live cell segmentation is a crucial step in biological image analysis and is also a challenging task because time-lapse microscopy cell sequences usually exhibit complex spatial structures and complicated temporal behaviors. In recent years, numerous deep learning-based methods have been proposed to tackle this task and obtained promising results. However, designing a network with excellent performance requires professional knowledge and expertise and is very time-consuming and labor-intensive. Recently emerged neural architecture search (NAS) methods hold great promise in eliminating these disadvantages, because they can automatically search an optimal network for the task.

Authors

  • Yanming Zhu
    School of Computer Science and Engineering, University of New South Wales, Sydney, NSW 2052, Australia.
  • Erik Meijering
    Biomedical Imaging Group Rotterdam, Departments of Medical Informatics and Radiology, Erasmus University Medical Center, Rotterdam, the Netherlands.