Increasing a microscope's effective field of view via overlapped imaging and machine learning.

Journal: Optics express
Published Date:

Abstract

This work demonstrates a multi-lens microscopic imaging system that overlaps multiple independent fields of view on a single sensor for high-efficiency automated specimen analysis. Automatic detection, classification and counting of various morphological features of interest is now a crucial component of both biomedical research and disease diagnosis. While convolutional neural networks (CNNs) have dramatically improved the accuracy of counting cells and sub-cellular features from acquired digital image data, the overall throughput is still typically hindered by the limited space-bandwidth product (SBP) of conventional microscopes. Here, we show both in simulation and experiment that overlapped imaging and co-designed analysis software can achieve accurate detection of diagnostically-relevant features for several applications, including counting of white blood cells and the malaria parasite, leading to multi-fold increase in detection and processing throughput with minimal reduction in accuracy.

Authors

  • Xing Yao
  • Vinayak Pathak
  • Haoran Xi
  • Amey Chaware
  • Colin Cooke
    Department of Electrical and Computer Engineering, Duke Pratt School of Engineering, Duke University, Durham, North Carolina, USA.
  • Kanghyun Kim
  • Shiqi Xu
    Department of Electrical & System Engineering, Washington University in St. Louis.
  • Yuting Li
    Department of Food Science and Nutrition, National Engineering Laboratory of Intelligent Food Technology and Equipment, Key Laboratory for Agro-Products Postharvest Handling of Ministry of Agriculture, Zhejiang Key Laboratory for Agro-Food Processing, Fuli Institute of Food Science, Zhejiang University, Hangzhou 310058, China.
  • Timothy Dunn
  • Pavan Chandra Konda
  • Kevin C Zhou
  • Roarke Horstmeyer
    Biomedical Engineering Department Duke University Durham NC 27708 USA.