Probing Diffusive Dynamics of Natural Tubule Nanoclays with Machine Learning.

Journal: ACS nano
Published Date:

Abstract

Reproducibility of the experimental results and object of study itself is one of the basic principles in science. But what if the object characterized by technologically important properties is natural and cannot be artificially reproduced one-to-one in the laboratory? The situation becomes even more complicated when we are interested in exploring stochastic properties of a natural system and only a limited set of noisy experimental data is available. In this paper we address these problems by exploring diffusive motion of some natural clays, halloysite and sepiolite, in a liquid environment. By using a combination of dark-field microscopy and machine learning algorithms, a quantitative theoretical characterization of the nanotubes' rotational diffusive dynamics is performed. Scanning the experimental video with the gradient boosting tree method, we can trace time dependence of the diffusion coefficient and probe different regimes of nonequilibrium rotational dynamics that are due to contacts with surfaces and other experimental imperfections. The method we propose is of general nature and can be applied to explore diffusive dynamics of various biological systems in real time.

Authors

  • Ilia A Iakovlev
    Theoretical Physics and Applied Mathematics Department, Ural Federal University, Mira Street 19, Ekaterinburg 620002, Russia.
  • Alexander Y Deviatov
    Theoretical Physics and Applied Mathematics Department, Ural Federal University, Mira Street 19, Ekaterinburg 620002, Russia.
  • Yuri Lvov
    Institute for Micromanufacturing, Louisiana Tech University, Ruston, Louisiana 71272, United States.
  • Gölnur Fakhrullina
    Institute of Fundamental Medicine and Biology, Kazan Federal University, Kreml uramı 18, Kazan Republic of Tatarstan, Russian Federation, 420008.
  • Rawil F Fakhrullin
    Institute of Fundamental Medicine and Biology, Kazan Federal University, Kreml uramı 18, Kazan Republic of Tatarstan, Russian Federation, 420008.
  • Vladimir V Mazurenko
    Theoretical Physics and Applied Mathematics Department, Ural Federal University, Mira Street 19, Ekaterinburg 620002, Russia.