Information Extraction From Electronic Health Records to Predict Readmission Following Acute Myocardial Infarction: Does Natural Language Processing Using Clinical Notes Improve Prediction of Readmission?

Journal: Journal of the American Heart Association
Published Date:

Abstract

Background Social risk factors influence rehospitalization rates yet are challenging to incorporate into prediction models. Integration of social risk factors using natural language processing (NLP) and machine learning could improve risk prediction of 30-day readmission following an acute myocardial infarction. Methods and Results Patients were enrolled into derivation and validation cohorts. The derivation cohort included inpatient discharges from Vanderbilt University Medical Center between January 1, 2007, and December 31, 2016, with a primary diagnosis of acute myocardial infarction, who were discharged alive, and not transferred from another facility. The validation cohort included patients from Dartmouth-Hitchcock Health Center between April 2, 2011, and December 31, 2016, meeting the same eligibility criteria described above. Data from both sites were linked to Centers for Medicare & Medicaid Services administrative data to supplement 30-day hospital readmissions. Clinical notes from each cohort were extracted, and an NLP model was deployed, counting mentions of 7 social risk factors. Five machine learning models were run using clinical and NLP-derived variables. Model discrimination and calibration were assessed, and receiver operating characteristic comparison analyses were performed. The 30-day rehospitalization rates among the derivation (n=6165) and validation (n=4024) cohorts were 15.1% (n=934) and 10.2% (n=412), respectively. The derivation models demonstrated no statistical improvement in model performance with the addition of the selected NLP-derived social risk factors. Conclusions Social risk factors extracted using NLP did not significantly improve 30-day readmission prediction among hospitalized patients with acute myocardial infarction. Alternative methods are needed to capture social risk factors.

Authors

  • Jeremiah R Brown
    Departments of Epidemiology and Biomedical Data Science, Dartmouth Geisel School of Medicine, Hanover, New Hampshire.
  • Iben M Ricket
    Departments of Epidemiology and Biomedical Data Science Dartmouth Geisel School of Medicine Hanover NH.
  • Ruth M Reeves
    Health Services Research & Development, VA Tennessee Valley Healthcare System, Nashville, TN, USA.
  • Rashmee U Shah
    Division of Cardiovascular Medicine, University of Utah School of Medicine, Salt Lake City.
  • Christine A Goodrich
    Departments of Epidemiology and Biomedical Data Science, Dartmouth Geisel School of Medicine, Hanover, New Hampshire.
  • Glen Gobbel
    Department of Biomedical Informatics Vanderbilt University Medical Center Nashville TN.
  • Meagan E Stabler
    Departments of Epidemiology and Biomedical Data Science, Dartmouth Geisel School of Medicine, Hanover, New Hampshire.
  • Amy M Perkins
    Deparment of Biostatistics, Vanderbilt University Medical Center, Nashville, Tennessee.
  • Freneka Minter
    Department of Biomedical Informatics Vanderbilt University Medical Center Nashville TN.
  • Kevin C Cox
    Departments of Epidemiology and Biomedical Data Science Dartmouth Geisel School of Medicine Hanover NH.
  • Chad Dorn
    Department of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, Tennessee.
  • Jason Denton
    Department of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, Tennessee.
  • Bruce E Bray
    Department of Biomedical Informatics, University of Utah, Salt Lake City, UT, USA.
  • Ramkiran Gouripeddi
    Department of Biomedical Informatics, University of Utah, Salt Lake City, UT, United States.
  • John Higgins
    Dartmouth College, Hanover, NH, USA.
  • Wendy W Chapman
    School of Medicine, University of Utah, Salt Lake City, Utah, US.
  • Todd MacKenzie
    Lia Harrington, Todd MacKenzie, and Saeed Hassanpour, Geisel School of Medicine at Dartmouth College, Hanover; Roberta diFlorio-Alexander, Katherine Trinh, and Arief Suriawinata, Dartmouth-Hitchcock Medical Center, Lebanon, NH.
  • Michael E Matheny
    Vanderbilt University School of Medicine, Nashville, TN.