3DGT-DDI: 3D graph and text based neural network for drug-drug interaction prediction.

Journal: Briefings in bioinformatics
Published Date:

Abstract

MOTIVATION: Drug-drug interactions (DDIs) occur during the combination of drugs. Identifying potential DDI helps us to study the mechanism behind the combination medication or adverse reactions so as to avoid the side effects. Although many artificial intelligence methods predict and mine potential DDI, they ignore the 3D structure information of drug molecules and do not fully consider the contribution of molecular substructure in DDI.

Authors

  • Haohuai He
    School of Intelligent Systems Engineering, Sun Yat-sen University, Shenzhen, 510275, China.
  • Guanxing Chen
    Artificial Intelligence Medical Center, School of Intelligent Systems Engineering, Sun Yat-Sen University, Shenzhen, 510275, China.
  • Calvin Yu-Chian Chen
    School of Intelligent Systems Engineering, Sun Yat-sen University, Shenzhen, 510275, China.