Uncertainty-aware deep co-training for semi-supervised medical image segmentation.

Journal: Computers in biology and medicine
Published Date:

Abstract

Semi-supervised learning has made significant strides in the medical domain since it alleviates the heavy burden of collecting abundant pixel-wise annotated data for semantic segmentation tasks. Existing semi-supervised approaches enhance the ability to extract features from unlabeled data with prior knowledge obtained from limited labeled data. However, due to the scarcity of labeled data, the features extracted by the models are limited in supervised learning, and the quality of predictions for unlabeled data also cannot be guaranteed. Both will impede consistency training. To this end, we proposed a novel uncertainty-aware scheme to make models learn regions purposefully. Specifically, we employ Monte Carlo Sampling as an estimation method to attain an uncertainty map, which can serve as a weight for losses to force the models to focus on the valuable region according to the characteristics of supervised learning and unsupervised learning. Simultaneously, in the backward process, we joint unsupervised and supervised losses to accelerate the convergence of the network via enhancing the gradient flow between different tasks. Quantitatively, we conduct extensive experiments on three challenging medical datasets. Experimental results show desirable improvements to state-of-the-art counterparts.

Authors

  • Xu Zheng
    Department of Orthopaedic Surgery, Shanghai Sixth People's Hospital Affiliated to Shanghai Jiao Tong University School of Medicine, Shanghai, China.
  • Chong Fu
    School of Computer Science and Engineering, Northeastern University, Shenyang 110169, China.
  • Haoyu Xie
    School of Computer Science and Engineering, Northeastern University, Shenyang 110819, China.
  • Jialei Chen
    School of Computer Science and Engineering, Northeastern University, Shenyang 110819, China.
  • Xingwei Wang
    Roche Tissue Diagnostics, Imaging and Algorithms, Digital Pathology, Santa Clara, California.
  • Chiu-Wing Sham
    School of Computer Science, The University of Auckland, New Zealand.