Evaluation of two semi-supervised learning methods and their combination for automatic classification of bone marrow cells.

Journal: Scientific reports
PMID:

Abstract

Differential bone marrow (BM) cell counting is an important test for the diagnosis of various hematological diseases. However, it is difficult to accurately classify BM cells due to non-uniformity and the lack of reproducibility of differential counting. Therefore, automatic classification systems have been developed in which deep learning is used. These systems requires large and accurately labeled datasets for training. To overcome this, we used semi-supervised learning (SSL), in which learning proceeds while labeling. We used three methods: self-training (ST), active learning (AL), and a combination of these methods, and attempted to automatically classify 16 types of BM cell images. ST involves data verification, as in AL, before adding them to the training dataset (confirmed self-training: CST). After 25 rounds of CST, AL, and CST + AL, the initial number of training data increased from 425 to 40,518; 3682; and 47,843, respectively. Accuracies for the test data of 50 images for each cell type were 0.944, 0.941, and 0.976, respectively. Data added with CST or AL showed some imbalances between classes, while CST + AL exhibited fewer imbalances. We suggest that CST + AL, when combined with two SSL methods, is efficient in increasing training data for the development of automatic BM cells classification systems.

Authors

  • Iori Nakamura
    Graduate School of Health Sciences, Hokkaido University.
  • Haruhi Ida
    Graduate School of Health Sciences, Hokkaido University.
  • Mayu Yabuta
    Graduate School of Health Sciences, Hokkaido University.
  • Wataru Kashiwa
    Graduate School of Medicine, Hokkaido University, Sapporo, Japan.
  • Maho Tsukamoto
    Graduate School of Health Sciences, Hokkaido University, Sapporo, Japan.
  • Shigeki Sato
    Department of Clinical Laboratory, Sapporo Hokuyu Hospital, Sapporo, Japan.
  • Syuichi Ota
    Department of Hematology, Sapporo Hokuyu Hospital, Sapporo, Japan.
  • Naoki Kobayashi
    Department of Diagnostic Radiology, Graduate School of Medical Sciences, Kumamoto University, Honjo 1-1-1, Kumamoto 860-8556, Japan (T.N., N.Y., N.K., Y.N., H.U., M.K., S.O., T.H.).
  • Hiromi Masauzi
    Faculty of Health Sciences, Hokkaido University.
  • Kazunori Okada
    Department of Computer Science, San Francisco State University, San Francisco, CA, United States of America.
  • Sanae Kaga
    Faculty of Health Sciences, Hokkaido University.
  • Keiko Miwa
    Faculty of Health Sciences, Hokkaido University.
  • Hiroshi Kanai
    Graduate School of Biomedical Engineering, Tohoku University, Sendai, Japan.
  • Nobuo Masauzi
    Faculty of Health Sciences, Hokkaido University.