Deep Learning for Brain MRI Confirms Patterned Pathological Progression in Alzheimer's Disease.

Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)
Published Date:

Abstract

Deep learning (DL) on brain magnetic resonance imaging (MRI) data has shown excellent performance in differentiating individuals with Alzheimer's disease (AD). However, the value of DL in detecting progressive structural MRI (sMRI) abnormalities linked to AD pathology has yet to be established. In this study, an interpretable DL algorithm named the Ensemble of 3-dimensional convolutional neural network (Ensemble 3DCNN) with enhanced parsing techniques is proposed to investigate the longitudinal trajectories of whole-brain sMRI changes denoting AD onset and progression. A set of 2369 T1-weighted images from the multi-centre Alzheimer's Disease Neuroimaging Initiative and Open Access Series of Imaging Studies cohorts are applied to model derivation, validation, testing, and pattern analysis. An Ensemble-3DCNN-based P-score is generated, based on which multiple brain regions, including amygdala, insular, parahippocampal, and temporal gyrus, exhibit early and connected progressive neurodegeneration. Complex individual variability in the sMRI is also observed. This study combining non-invasive sMRI and interpretable DL in detecting patterned sMRI changes confirmed AD pathological progression, shedding new light on predicting AD progression using whole-brain sMRI.

Authors

  • Dan Pan
    Department of Industrial Engineering, Tsinghua University, Beijing, China.
  • An Zeng
    1] School of Systems Science, Beijing Normal University, Beijing 100875, P. R. China [2] Institute of Information Economy, Alibaba Business School, Hangzhou Normal University, Hangzhou 310036, P. R. China.
  • Baoyao Yang
  • Gangyong Lai
    Faculty of Computers, Guangdong University of Technology, Guangzhou, 510006, China.
  • Bing Hu
    Department of Gastroenterology, West China Hospital, Sichuan University, Chengdu, China.
  • Xiaowei Song
    School of Artificial Intelligence, Hebei University of Technology, Tianjin 300130, P.R.China.
  • Tianzi Jiang
    Brainnetome Center and National Laboratory of Pattern Recognition, Institute of Automation, Chinese Academy of Sciences, 100190 Beijing, China; CAS Center for Excellence in Brain Science and Intelligence Technology, Chinese Academy of Sciences, 100190 Beijing, China; University of Chinese Academy of Sciences, 100049 Beijing, China.