Transferable and Interpretable Treatment Effectiveness Prediction for Ovarian Cancer via Multimodal Deep Learning.

Journal: AMIA ... Annual Symposium proceedings. AMIA Symposium
Published Date:

Abstract

Ovarian cancer, a potentially life-threatening disease, is often difficult to treat. There is a critical need for innovations that can assist in improved therapy selection. Although deep learning models are showing promising results, they are employed as a "black-box" and require enormous amounts of data. Therefore, we explore the transferable and interpretable prediction of treatment effectiveness for ovarian cancer patients. Unlike existing works focusing on histopathology images, we propose a multimodal deep learning framework which takes into account not only large histopathology images, but also clinical variables to increase the scope of the data. The results demonstrate that the proposed models achieve high prediction accuracy and interpretability, and can also be transferred to other cancer datasets without significant loss of performance.

Authors

  • Emily Nguyen
    Computer Science Department, University of Southern California, Los Angeles, CA, U.S.A.
  • Zijun Cui
    Computer Science Department, University of Southern California, Los Angeles, CA, U.S.A.
  • Georgia Kokaraki
    Keck School of Medicine, University of Southern California, Los Angeles, CA, U.S.A.
  • Joseph Carlson
    Department of Oncology and Pathology (Drs. Carlson and Haglund), Karolinska University Hospital, Stockholm, Sweden.
  • Yan Liu
    Department of Clinical Microbiology, Shanghai Tenth People's Hospital, School of Medicine, Tongji University, Shanghai, 200072, People's Republic of China.