An artificial intelligence-based model for cell killing prediction: development, validation and explainability analysis of the ANAKIN model.

Journal: Physics in medicine and biology
PMID:

Abstract

The present work develops ANAKIN: an. ANAKIN is trained and tested over 513 cell survival experiments with different types of radiation contained in the publicly available PIDE database. We show how ANAKIN accurately predicts several relevant biological endpoints over a wide broad range on ion beams and for a high number of cell-lines. We compare the prediction of ANAKIN to the only two radiobiological models forprediction used in clinics, that is theand the(LEM version III), showing how ANAKIN has higher accuracy over the all considered cell survival fractions. At last, via modern techniques of(XAI), we show how ANAKIN predictions can be understood and explained, highlighting how ANAKIN is in fact able to reproduce relevant well-known biological patterns, such as the overkilling effect.

Authors

  • Francesco G Cordoni
    Department of Civil, Environmental and Mechanical Engineering, via Mesiano 77, I-38123, Trento, Italy.
  • Marta Missiaggia
    Trento Institute for Fundamental Physics and Application (TIFPA), via Sommarive 15, I-38123, Trento, Italy.
  • Emanuele Scifoni
    Trento Institute for Fundamental Physics and Application (TIFPA), via Sommarive 15, I-38123, Trento, Italy.
  • Chiara La Tessa
    Trento Institute for Fundamental Physics and Application (TIFPA), via Sommarive 15, I-38123, Trento, Italy.