Shedding Light on Colorectal Cancer: An In Vivo Raman Spectroscopy Approach Combined with Deep Learning Analysis.

Journal: International journal of molecular sciences
Published Date:

Abstract

Raman spectroscopy has emerged as a powerful tool in medical, biochemical, and biological research with high specificity, sensitivity, and spatial and temporal resolution. Recent advanced Raman systems, such as portable Raman systems and fiber-optic probes, provide the potential for accurate in vivo discrimination between healthy and cancerous tissues. In our study, a portable Raman probe spectrometer was tested in immunosuppressed mice for the in vivo localization of colorectal cancer malignancies from normal tissue margins. The acquired Raman spectra were preprocessed, and principal component analysis (PCA) was performed to facilitate discrimination between malignant and normal tissues and to highlight their biochemical differences using loading plots. A transfer learning model based on a one-dimensional convolutional neural network (1D-CNN) was employed for the Raman spectra data to assess the classification accuracy of Raman spectra in live animals. The 1D-CNN model yielded an 89.9% accuracy and 91.4% precision in tissue classification. Our results contribute to the field of Raman spectroscopy in cancer diagnosis, highlighting its promising role within clinical applications.

Authors

  • Maria Anthi Kouri
    2nd Department of Radiology, Medical School, National and Kapodistrian University of Athens, 11527 Athens, Greece.
  • Maria Karnachoriti
    Physics Department, School of Applied Mathematical and Physical Sciences, National Technical University of Athens, Iroon Politechniou 9, 15780 Athens, Greece.
  • Ellas Spyratou
    2nd Department of Radiology, Medical School, National and Kapodistrian University of Athens, 11527 Athens, Greece.
  • Spyros Orfanoudakis
    Physics Department, School of Applied Mathematical and Physical Sciences, National Technical University of Athens, Iroon Politechniou 9, 15780 Athens, Greece.
  • Dimitris Kalatzis
    2nd Department of Radiology, Medical School, National and Kapodistrian University of Athens, 11527 Athens, Greece.
  • Athanassios G Kontos
    Physics Department, School of Applied Mathematical and Physical Sciences, National Technical University of Athens, Iroon Politechniou 9, 15780 Athens, Greece.
  • Ioannis Seimenis
    Department of Medicine, Democritus University of Thrace, Alexandropoli, Greece.
  • Efstathios P Efstathopoulos
    2nd Department of Radiology, Medical School, National and Kapodistrian University of Athens, 11527 Athens, Greece.
  • Alexandra Tsaroucha
    Laboratory of Bioethics, School of Medicine, Democritus University of Thrace, 68100 Alexandroupolis, Greece.
  • Maria Lambropoulou
    Laboratory of Histology-Embryology, School of Medicine, Democritus University of Thrace, 68100 Alexandroupolis, Greece.