PotatoG-DKB: a potato gene-disease knowledge base mined from biological literature.

Journal: PeerJ
PMID: 39372719

Abstract

BACKGROUND: Potato is the fourth largest food crop in the world, but potato cultivation faces serious threats from various diseases and pests. Despite significant advancements in research on potato disease resistance, these findings are scattered across numerous publications. For researchers, obtaining relevant knowledge by reading and organizing a large body of literature is a time-consuming and labor-intensive process. Therefore, systematically extracting and organizing the relationships between potato genes and diseases from the literature to establish a potato gene-disease knowledge base is particularly important. Unfortunately, there is currently no such gene-disease knowledge base available.

Authors

  • Congjiao Xie
    College of Computer and Information Engineering, Inner Mongolia Agricultural University, Hohhot, Inner Mongolia, China.
  • Jing Gao
    Department of Gastroenterology 3, Hubei University of Medicine, Renmin Hospital, Shiyan, Hubei, China.
  • Junjie Chen
    College of Computer Science and Technology, Taiyuan University of Technology, Taiyuan, China.
  • Xuyang Zhao
    College of Information Engineering, Northwest A&F University, Yangling, 712100, P. R. China.

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