Prediction of tumor origin in cancers of unknown primary origin with cytology-based deep learning.

Journal: Nature medicine
PMID:

Abstract

Cancer of unknown primary (CUP) site poses diagnostic challenges due to its elusive nature. Many cases of CUP manifest as pleural and peritoneal serous effusions. Leveraging cytological images from 57,220 cases at four tertiary hospitals, we developed a deep-learning method for tumor origin differentiation using cytological histology (TORCH) that can identify malignancy and predict tumor origin in both hydrothorax and ascites. We examined its performance on three internal (n = 12,799) and two external (n = 14,538) testing sets. In both internal and external testing sets, TORCH achieved area under the receiver operating curve values ranging from 0.953 to 0.991 for cancer diagnosis and 0.953 to 0.979 for tumor origin localization. TORCH accurately predicted primary tumor origins, with a top-1 accuracy of 82.6% and top-3 accuracy of 98.9%. Compared with results derived from pathologists, TORCH showed better prediction efficacy (1.677 versus 1.265, P < 0.001), enhancing junior pathologists' diagnostic scores significantly (1.326 versus 1.101, P < 0.001). Patients with CUP whose initial treatment protocol was concordant with TORCH-predicted origins had better overall survival than those who were administrated discordant treatment (27 versus 17 months, P = 0.006). Our study underscores the potential of TORCH as a valuable ancillary tool in clinical practice, although further validation in randomized trials is warranted.

Authors

  • Fei Tian
    Department of Colorectal Cancer, National Clinical Research Center for Cancer, Key Laboratory of Molecular Cancer Epidemiology of Tianjin, Tianjin's Clinical Research Center for Cancer, Key Laboratory of Cancer Prevention and Therapy, Tianjin Medical University Cancer Institute and Hospital, Tianjin Medical University, Tianjin, China.
  • Dong Liu
    Department of Gastrointestinal Surgery, The Third Hospital of Hebei Medical University, Shijiazhuang, China.
  • Na Wei
    Department of Obstetrics and Gynecology, Weifang Yi Du Center Hospital, Qingzhou, Shandong, PR China.
  • Qianqian Fu
    Department of Pathology, Tianjin's Clinical Research Center for Cancer, Tianjin Key Laboratory of Digestive Cancer, National Clinical Research Center for Cancer, Tianjin Medical University Cancer Institute and Hospital, Tianjin Medical University, Tianjin, China.
  • Lin Sun
    College of Computer and Information Engineering, Henan Normal University, Xinxiang, China.
  • Wei Liu
    Department of Radiation Oncology, Mayo Clinic, Scottsdale, AZ, United States.
  • Xiaolong Sui
    Department of Pathology, Yantai Yuhuangding Hospital of Qingdao University, Yantai, China.
  • Kathryn Tian
    Harvard Dunster House, Harvard University, Cambridge, MA, USA.
  • Genevieve Nemeth
    Harvard Medical School, Boston, MA, USA.
  • Jingyu Feng
    School of Biological Science and Medical Engineering, Beihang University, Beijing, China.
  • Jingjing Xu
    Visionary Intelligence Ltd., Beijing, China.
  • Lin Xiao
    College of Information Science and Engineering, Jishou University, Jishou 416000, China. Electronic address: xiaolin860728@163.com.
  • Junya Han
    Department of Pathology, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, China.
  • Jingjie Fu
    Department of Pathology, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, China.
  • Yinhua Shi
    Department of Pathology, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, China.
  • Yichen Yang
    The First Clinical Medical College, Lanzhou University, Lanzhou, China.
  • Jia Liu
    Department of Colorectal Oncology, Tianjin Medical University Cancer Institute and Hospital, National Clinical Research Center for Cancer, Tianjin's Clinical Research Center for Cancer, Tianjin Key Laboratory of Digestive Cancer, Tianjin, China.
  • Chunhong Hu
    Department of Oncology, The Second Xiangya Hospital, Central South University, Changsha, Hunan, China.
  • Bin Feng
    Department of Orthopedic Surgery, Peking Union Medical College Hospital, Chinese Academy of Medical Science and Peking Union Medical College, Beijing, China.
  • Yan Sun
    Department of Biochemistry, Albert Einstein College of Medicine, New York, NY, United States.
  • Yunjun Wang
    Department of Pathology, Yantai Yuhuangding Hospital of Qingdao University, Yantai, China.
  • Guohua Yu
    Department of Oncology, Weifang People's Hospital, Weifang, Shandong, China.
  • Dalu Kong
    Department of Colorectal Oncology, Tianjin Medical University Cancer Institute and Hospital, National Clinical Research Center for Cancer, Tianjin's Clinical Research Center for Cancer, Tianjin Key Laboratory of Digestive Cancer, Tianjin, China.
  • Meiyun Wang
  • Wencai Li
    The First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan Province, PR China.
  • Kexin Chen
    Zhongshan School of Medicine, Sun Yat-sen University, Guangzhou, China.
  • Xiangchun Li
    Tianjin Cancer Institute, National Clinical Research Center for Cancer, Key Laboratory of Cancer Prevention and Therapy of Tianjin, Tianjin Medical University Cancer Institute and Hospital, Tianjin Medical University, Tianjin, China.