An Automated Deep Learning-Based Framework for Uptake Segmentation and Classification on PSMA PET/CT Imaging of Patients with Prostate Cancer.

Journal: Journal of imaging informatics in medicine
PMID:

Abstract

Uptake segmentation and classification on PSMA PET/CT are important for automating whole-body tumor burden determinations. We developed and evaluated an automated deep learning (DL)-based framework that segments and classifies uptake on PSMA PET/CT. We identified 193 [F] DCFPyL PET/CT scans of patients with biochemically recurrent prostate cancer from two institutions, including 137 [F] DCFPyL PET/CT scans for training and internally testing, and 56 scans from another institution for external testing. Two radiologists segmented and labelled foci as suspicious or non-suspicious for malignancy. A DL-based segmentation was developed with two independent CNNs. An anatomical prior guidance was applied to make the DL framework focus on PSMA-avid lesions. Segmentation performance was evaluated by Dice, IoU, precision, and recall. Classification model was constructed with multi-modal decision fusion framework evaluated by accuracy, AUC, F1 score, precision, and recall. Automatic segmentation of suspicious lesions was improved under prior guidance, with mean Dice, IoU, precision, and recall of 0.700, 0.566, 0.809, and 0.660 on the internal test set and 0.680, 0.548, 0.749, and 0.740 on the external test set. Our multi-modal decision fusion framework outperformed single-modal and multi-modal CNNs with accuracy, AUC, F1 score, precision, and recall of 0.764, 0.863, 0.844, 0.841, and 0.847 in distinguishing suspicious and non-suspicious foci on the internal test set and 0.796, 0.851, 0.865, 0.814, and 0.923 on the external test set. DL-based lesion segmentation on PSMA PET is facilitated through our anatomical prior guidance strategy. Our classification framework differentiates suspicious foci from those not suspicious for cancer with good accuracy.

Authors

  • Yang Li
    Occupation of Chinese Center for Disease Control and Prevention, Beijing, China.
  • Maliha R Imami
    Russell H. Morgan Department of Radiology and Radiological Sciences, Johns Hopkins University School of Medicine, 601 N. Caroline St., Baltimore, MD 21287, USA.
  • Linmei Zhao
    Russell H. Morgan Department of Radiology and Radiological Sciences, Johns Hopkins University School of Medicine, 601 N. Caroline St., Baltimore, MD 21287, USA.
  • Alireza Amindarolzarbi
    Russell H. Morgan Department of Radiology and Radiological Sciences, Johns Hopkins University School of Medicine, 601 N. Caroline St., Baltimore, MD 21287, USA.
  • Esther Mena
    Molecular Imaging Branch, National Cancer Institute, National Institutes of Health, 10 Center Dr., MSC 1182, Building 10, Room B3B85, Bethesda, Maryland, USA (M.J.B., S.A.H., N.S.L., E.C.Y., T.E.P., B.S., L.L., E.M., P.L.C., B.T.).
  • Jeffrey Leal
    Russell H. Morgan Department of Radiology and Radiological Sciences, Johns Hopkins University School of Medicine, 601 N. Caroline St., Baltimore, MD 21287, USA.
  • Junyu Chen
    Department of Electrical and Computer Engineering, Johns Hopkins University, Baltimore, MD, 21287, USA.
  • Andrei Gafita
    Radiology and Radiological Science, Johns Hopkins University School of Medicine, Baltimore, MD, United States.
  • Andrew F Voter
    Department of Biomolecular Chemistry , University of Wisconsin School of Medicine and Public Health , Madison , Wisconsin 53706 , United States.
  • Xin Li
    Veterinary Diagnostic Center, Shanghai Animal Disease Control Center, Shanghai, China.
  • Yong Du
    Biomedical Engineering DepartmentUniversity of Houston Houston TX 77204 USA.
  • Chengzhang Zhu
    School of Information Science and Engineering, Central South University, Changsha, China; Mobile Health Ministry of Education-China Mobile Joint Laboratory, Changsha, China.
  • Peter L Choyke
    Molecular Imaging Program, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA.
  • Beiji Zou
    School of Information Science and Engineering, Central South University, Changsha, China; Mobile Health Ministry of Education-China Mobile Joint Laboratory, Changsha, China.
  • Zhicheng Jiao
  • Steven P Rowe
    The Russell H. Morgan Department of Radiology and Radiological Science, Johns Hopkins University School of Medicine, Baltimore, Maryland. Electronic address: srowe8@jhmi.edu.
  • Martin G Pomper
    Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD, United States of America.
  • Harrison X Bai
    Department of Radiology, Hospital of the University of Pennsylvania, Philadelphia, Pennsylvania.