Advancing Automatic Gastritis Diagnosis: An Interpretable Multilabel Deep Learning Framework for the Simultaneous Assessment of Multiple Indicators.

Journal: The American journal of pathology
PMID:

Abstract

The evaluation of morphologic features, such as inflammation, gastric atrophy, and intestinal metaplasia, is crucial for diagnosing gastritis. However, artificial intelligence analysis for nontumor diseases like gastritis is limited. Previous deep learning models have omitted important morphologic indicators and cannot simultaneously diagnose gastritis indicators or provide interpretable labels. To address this, an attention-based multi-instance multilabel learning network (AMMNet) was developed to simultaneously achieve the multilabel diagnosis of activity, atrophy, and intestinal metaplasia with only slide-level weak labels. To evaluate AMMNet's real-world performance, a diagnostic test was designed to observe improvements in junior pathologists' diagnostic accuracy and efficiency with and without AMMNet assistance. In this study of 1096 patients from seven independent medical centers, AMMNet performed well in assessing activity [area under the curve (AUC), 0.93], atrophy (AUC, 0.97), and intestinal metaplasia (AUC, 0.93). The false-negative rates of these indicators were only 0.04, 0.08, and 0.18, respectively, and junior pathologists had lower false-negative rates with model assistance (0.15 versus 0.10). Furthermore, AMMNet reduced the time required per whole slide image from 5.46 to 2.85 minutes, enhancing diagnostic efficiency. In block-level clustering analysis, AMMNet effectively visualized task-related patches within whole slide images, improving interpretability. These findings highlight AMMNet's effectiveness in accurately evaluating gastritis morphologic indicators on multicenter data sets. Using multi-instance multilabel learning strategies to support routine diagnostic pathology deserves further evaluation.

Authors

  • Mengke Ma
    The People's Hospital of Liaoning Province, Command Postgraduate Training Base, Jinzhou Medical University, Shenyang, China.
  • Xixi Zeng
    Department of Pathology, Fudan University Shanghai Cancer Center, Shanghai, China; Department of Oncology, Fudan University Shanghai Medical College, Shanghai, China; Institute of Pathology, Fudan University, Shanghai, China.
  • Linhao Qu
    Digital Medical Research Center, School of Basic Medical Science, Fudan University, Shanghai Key Lab of Medical Image Computing and Computer Assisted Intervention, Shanghai 200032, People's Republic of China.
  • Xia Sheng
    Hewlett Packard Labs, Hewlett Packard Enterprise, Milpitas, CA, USA.
  • Hongzheng Ren
    Department of Pathology, Gongli Hospital, Naval Medical University, Shanghai, China.
  • Weixiang Chen
    Department of Automation, Beijing National Research Center for Information Science and Technology, Tsinghua University, Beijing, China.
  • Bin Li
    Department of Magnetic Resonance Imaging (MRI), Beijing Shijitan Hospital, Capital Medical University, Beijing, China.
  • Qinghua You
    Department of Pathology, Shanghai Pudong Hospital, Fudan University Pudong Medical Center, Shanghai, China.
  • Li Xiao
    Key Laboratory of Intelligent Information Processing, Advanced Computer Research Center, State Key Laboratory of Computer Architecture, Institute of Computing Technology, Chinese Academy of Sciences, Beijing 100190, China.
  • Yi Wang
    Department of Neurology, Children's Hospital of Fudan University, National Children's Medical Center, Shanghai, China.
  • Mei Dai
    Information Center, Fudan University Shanghai Cancer Center, Shanghai, China.
  • Boqiang Zhang
    Shanghai Foremost Medical Technology Co. Ltd., Shanghai, China.
  • Changqing Lu
    Shanghai Foremost Medical Technology Co. Ltd., Shanghai, China.
  • Weiqi Sheng
    Department of Pathology, Fudan University Shanghai Cancer Center, Shanghai, China; Department of Oncology, Fudan University Shanghai Medical College, Shanghai, China; Institute of Pathology, Fudan University, Shanghai, China. Electronic address: shengweiqi2006@163.com.
  • Dan Huang
    Department of Anesthesiology, The Second Affiliated Hospital of Soochow University, Suzhou 215004, China.; Department of Anesthesiology, Renji Hospital, School of Medicine, Shanghai Jiaotong University, Shanghai 200127, China.