CGDM-GAN: An Adversarial Network Approach with Self-supervised Learning for Site Effect Removal.

Journal: Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference
PMID:

Abstract

Imaging data collected from different sites is difficult to pool together due to unwarranted variations introduced by different acquisition protocols or scanners. Data harmonization is an effective way to mitigate site-specific bias while preserving the intrinsic image properties, thereby increasing the sample size and enhancing the generalization of models. Although various harmonization methods exist, their performance on specific tasks is often unsatisfactory. Here, we proposed a novel approach, CGDM-GAN, by combining the advantages of generative models, maximum discrepancy theory, and gradient discrepancy minimization with self-supervised learning to harmonize site effects and improve cross-site classification performance. The proposed CGDM-GAN was successfully conducted on synthetic dataset, and further validated on in-house and ABCD datasets, outperforming three data harmonization methods, including ComBat, CycleGAN, and MCD-GAN, suggesting its potential for removing site effects and improving cross-site neuroimaging classification.

Authors

  • Xiangxiang Cui
  • Dongmei Zhi
    State Key Laboratory of Cognitive Neuroscience and Learning, Beijing Normal University, Beijing, China.
  • Weizheng Yan
    National Laboratory of Pattern Recognition and Brainnetome Center, Institute of Automation, Chinese Academy of Sciences, Beijing 100190, China; University of Chinese Academy of Sciences, Beijing 100049, China.
  • Vince D Calhoun
    Mind Research Network & Lovelace Biomedical and Environmental Research Institute, Albuquerque, New Mexico; Department of Psychiatry and Behavioral Sciences, University of New Mexico, Albuquerque, New Mexico; Department of Electrical and Computer Engineering, University of New Mexico, Albuquerque, New Mexico; Department of Neurosciences, University of New Mexico, Albuquerque, New Mexico.
  • Chuanjun Zhuo
    Tianjin Anning Hospital, Tianjin, China.
  • Jing Sui
    The Mind Research Network, Albuquerque, NM 87106, USA; Brainnetome Center and National Laboratory of Pattern Recognition, Institute of Automation, Chinese Academy of Sciences, Beijing 100190, China.