AIMC Topic: Adenylate Kinase

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Adaptive Ensemble Refinement of Protein Structures in High Resolution Electron Microscopy Density Maps with Radical Augmented Molecular Dynamics Flexible Fitting.

Journal of chemical information and modeling Sep 4, 2023
Recent advances in cryo-electron microscopy (cryo-EM) have enabled modeling macromolecular complexes that are essential components of the cellular machinery. The density maps derived from cryo-EM experiments are often integrated with manual, knowledg...
Artificial Intelligence Molecular Dynamics Simulation Microscopy, Electron Cryoelectron Microscopy Adenylate Kinase
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SPECTRUS: A Dimensionality Reduction Approach for Identifying Dynamical Domains in Protein Complexes from Limited Structural Datasets.

Structure (London, England : 1993) Jul 9, 2015
Identifying dynamical, quasi-rigid domains in proteins provides a powerful means for characterizing functionally oriented structural changes via a parsimonious set of degrees of freedom. In fact, the relative displacements of few dynamical domains us...
Software Escherichia coli Models, Molecular Internet Thermodynamics Protein Structure, Tertiary Capsid Multifactor Dimensionality Reduction Ion Channels Adenylate Kinase Tobacco mosaic satellite virus
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