AIMC Topic: Bacteriophage T4

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A Hybrid OPES-eABF Framework for Efficient Exploration and Data-Driven Collective Variable Discovery in Complex Free-Energy Landscapes.

Journal of chemical information and modeling Dec 13, 2025
Molecular dynamics (MD) simulations are powerful tools for studying biomolecular systems, but they are fundamentally limited by accessible time scales, making the study of rare events such as protein folding or ligand unbinding computationally challe...
Machine Learning Benzene Molecular Dynamics Simulation Dipeptides Oligopeptides Thermodynamics Protein Folding Bacteriophage T4 Muramidase
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Identification of the tail assembly chaperone genes of T4-Like phages suggests a mechanism other than translational frameshifting for biogenesis of their encoded proteins.

Virology Nov 18, 2021
Tape measure (TM) proteins are essential for the formation of long-tailed phages. TM protein assembly into tails requires the action of tail assembly chaperones (TACs). TACs (e.g. gpG and gpT of E. coli phage lambda) are usually produced in a short (...
Bacteria Computational Biology Escherichia coli Amino Acid Sequence Genome, Viral Sequence Alignment Sequence Homology, Amino Acid Bacteriophage T4 Conserved Sequence Frameshifting, Ribosomal Molecular Chaperones Viral Tail Proteins Virion Virus Assembly
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