Digital phenotyping from heart rate dynamics: Identification of zero-poles models with data-driven evolutionary learning.

Journal: Computers in biology and medicine
PMID:

Abstract

Heart rate response to physical activity is widely investigated in clinical and training practice, as it provides information on a person's physical state. For emerging digital phenotyping approaches, there is a need for individualized model estimation. In this study, we propose a zero-poles model and a data-driven evolutionary learning method for identification. We also perform a comparison with existing first and second order models and gradient descent identification methods. The proposed model is based on a five-phase description of heart rate dynamics. Data was collected from 30 healthy participants using a treadmill and a thoracic sensor in two protocols (static and dynamic), for increasing and decreasing activity. Results show that the zero-poles model is a good fit for heart rate response to exercise (Pearson's coefficient ρ>.95), while first and second order models are also suitable (ρ>.92). The evolutionary learning method shows excellent results for fast model identification, in comparison with least-squares methods (p<.03). We surmise that the parameters of investigated linear dynamic models make good candidates for digital biomarkers and continuous monitoring.

Authors

  • Adrian Patrascu
    Centre for Interdisciplinary Research in Physical Education and Sport, Babes-Bolyai University, Cluj-Napoca, Romania.
  • Andreea Ion
    Complex Systems Laboratory, University Politehnica of Bucharest, Bucharest, Romania.
  • Maarja Vislapuu
    Centre for Elderly and Nursing Home Medicine, University of Bergen, Bergen, Norway; Department of Nursing, VID Specialized University, Bergen, Norway.
  • Bettina S Husebo
    Centre for Elderly and Nursing Home Medicine, University of Bergen, Bergen, Norway; Neuro-SysMed Center, University of Bergen, Bergen, Norway.
  • Irina Andra Tache
    Department of Automatic Control and Systems Engineering, University Politehnica of Bucharest, Bucharest, Romania; Department of Image Fusion and Analytics, Siemens SRL, Brasov, Romania.
  • Haakon Reithe
    Centre for Elderly and Nursing Home Medicine, University of Bergen, Bergen, Norway; Neuro-SysMed Center, University of Bergen, Bergen, Norway.
  • Monica Patrascu
    Complex Systems Laboratory, University Politehnica of Bucharest, Bucharest, Romania; Centre for Elderly and Nursing Home Medicine, University of Bergen, Bergen, Norway; Neuro-SysMed Center, University of Bergen, Bergen, Norway. Electronic address: monica.patrascu@uib.no.