RBPsuite 2.0: an updated RNA-protein binding site prediction suite with high coverage on species and proteins based on deep learning.

Journal: BMC biology
PMID: 40069726

Abstract

BACKGROUND: RNA-binding proteins (RBPs) play crucial roles in many biological processes, and computationally identifying RNA-RBP interactions provides insights into the biological mechanism of diseases associated with RBPs.

Authors

  • Xiaoyong Pan
    Department of Veterinary Clinical and Animal Sciences, University of Copenhagen, Copenhagen, Denmark. xypan172436@gmail.com.
  • Yi Fang
    Department of Neurosurgery, The Fuzhou General Hospital, Fuzhou, China.
  • Xiaojian Liu
    Institute of Image Processing and Pattern Recognition, Shanghai Jiao Tong University, and Key Laboratory of System Control and Information Processing, Ministry of Education of China, Shanghai, 200240, China.
  • Xiaoyu Guo
    Johns Hopkins University, Baltimore, MD, USA.
  • Hong-Bin Shen
    Institute of Image Processing and Pattern Recognition, Shanghai Jiao Tong University, Shanghai, 200240, People's Republic of China. hbshen@sjtu.edu.cn.

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