Spatiotemporal Implicit Neural Representation for Unsupervised Dynamic MRI Reconstruction.

Journal: IEEE transactions on medical imaging
PMID:

Abstract

Supervised Deep-Learning (DL)-based reconstruction algorithms have shown state-of-the-art results for highly-undersampled dynamic Magnetic Resonance Imaging (MRI) reconstruction. However, the requirement of excessive high-quality ground-truth data hinders their applications due to the generalization problem. Recently, Implicit Neural Representation (INR) has emerged as a powerful DL-based tool for solving the inverse problem by characterizing the attributes of a signal as a continuous function of corresponding coordinates in an unsupervised manner. In this work, we proposed an INR-based method to improve dynamic MRI reconstruction from highly undersampled $\boldsymbol {k}$ -space data, which only takes spatiotemporal coordinates as inputs and does not require any training on external datasets or transfer-learning from prior images. Specifically, the proposed method encodes the dynamic MRI images into neural networks as an implicit function, and the weights of the network are learned from sparsely-acquired ( $\boldsymbol {k}$ , t)-space data itself only. Benefiting from the strong implicit continuity regularization of INR together with explicit regularization for low-rankness and sparsity, our proposed method outperforms the compared state-of-the-art methods at various acceleration factors. E.g., experiments on retrospective cardiac cine datasets show an improvement of 0.6-2.0 dB in PSNR for high accelerations (up to $40.8\times $ ). The high-quality and inner continuity of the images provided by INR exhibit great potential to further improve the spatiotemporal resolution of dynamic MRI. The code is available at: https://github.com/AMRI-Lab/INR_for_DynamicMRI.

Authors

  • Jie Feng
  • Ruimin Feng
    School of Biomedical Engineering, Shanghai Jiao Tong University, Shanghai, China.
  • Qing Wu
    5 Department of Environmental and Occupational Health, School of Community Health Sciences, University of Nevada , Las Vegas, Nevada.
  • Xin Shen
  • Lixuan Chen
  • Xin Li
    Veterinary Diagnostic Center, Shanghai Animal Disease Control Center, Shanghai, China.
  • Li Feng
    Department of Radiation Oncology, China-Japan Union Hospital of Jilin University, Changchun, China.
  • Jingjia Chen
  • Zhiyong Zhang
  • Chunlei Liu
    Department of Electrical Engineering and Computer Sciences, University of California, Berkeley, CA, USA.; Helen Wills Neuroscience Institute, University of California, Berkeley, CA, USA.
  • Yuyao Zhang
    School of Information and Science and Technology, ShanghaiTech University, Shanghai, China.
  • Hongjiang Wei
    Institute for Medical Imaging Technology, School of Biomedical Engineering, Shanghai Jiao Tong University, Shanghai, China. Electronic address: hongjiang.wei@sjtu.edu.cn.