Genome Mining and Chemistry-Driven Discovery of a Cell Wall Lipopeptide Signature for subsp. Ancestral Lineage.

Journal: ACS infectious diseases
Published Date:

Abstract

subsp. () causes Johne's disease (JD), a chronic infection responsible for considerable economic losses to dairy industries worldwide. Genetically clonal, has evolved into three distinct genetic lineages designated CII, for bovine strains, and SI and SIII, for ovine strains. Previous studies have established that does not produce glycopeptidolipids, characteristic of the cell wall surface of mycobacteria belonging to the complex, but rather sugar-free lipopeptide compounds synthesized by nonribosomal peptide synthetases. In this study, we combined genomic, machine learning, (bio)chemical, and analytical approaches to identify the metabolites biosynthesized by NRPS in the most ancestral SI strains of . We thus characterized a lipotripeptide (L3P-2) signature for the SI genetic lineage, demonstrating that the evolution of this subspecies has been accompanied by a diversification of the cell wall lipopeptides. Finally, L3P-2 shows promise for improved serological diagnosis of JD.

Authors

  • John P Bannantine
    USDA─Agricultural Research Service, National Animal Disease Center, Ames, Iowa 50010, United States.
  • Gilles Etienne
    Institut de Pharmacologie et de Biologie Structurale (IPBS) UMR-5089, CNRS/Université Toulouse, Toulouse 31000, France.
  • Anne Lemassu
    Institut de Pharmacologie et de Biologie Structurale (IPBS) UMR-5089, CNRS/Université Toulouse, Toulouse 31000, France.
  • Thierry Cochard
    INRAE, UMR ISP 1282, Université de Tours, Nouzilly 37380, France.
  • Christelle Ganneau
    Institut Pasteur, Université Paris Cité, CNRS UMR3523, Chimie des Biomolécules, Chem4Life, Paris 75015, France.
  • Sandrine Melo
    INRAE, UMR ISP 1282, Université de Tours, Nouzilly 37380, France.
  • Cyril Conde
    INRAE, UMR ISP 1282, Université de Tours, Nouzilly 37380, France.
  • Hedia Marrakchi
    Institut de Pharmacologie et de Biologie Structurale (IPBS) UMR-5089, CNRS/Université Toulouse, Toulouse 31000, France.
  • Sylvie Bay
    Institut Pasteur, Université Paris Cité, CNRS UMR3523, Chimie des Biomolécules, Chem4Life, Paris 75015, France.
  • Franck Biet
    INRAE, UMR ISP 1282, Université de Tours, Nouzilly 37380, France.