A deep learning model for diagnosis of inherited retinal diseases.

Journal: Scientific reports
Published Date:

Abstract

To evaluate the performance of a multi-input deep learning (DL) model in detecting two common inherited retinal diseases (IRDs), i.e. retinitis pigmentosa (RP) and Stargardt disease (STGD), and differentiating them from healthy eyes. This cross-sectional study includes 391 cases, consisting of 158 subjects with RP, 62 patients with STGD, and 171 healthy individuals. The image dataset is publicly available at http://en.riovs.sbmu.ac.ir/Access-to-Inherited-Retinal-Diseases-Image-Bank . Separate networks using the same hyperparameters were trained and tested on the dataset. Two single-input MobileNetV2 networks were employed for color fundus photography (CFP) and infrared (IR) images, and a multi-input MobileNetV2 network was applied using both imaging modalities simultaneously. The single-input MobileNetV2 achieved 94.44% diagnostic accuracy using CFP, and 94.44% accuracy employing IR images, respectively. The multi-input MobileNetV2 network outperformed both single-input networks with an accuracy of 96.3%. The impact of single-input and multi-input architectures was further evaluated on state-of-the-art neural network models and machine learning algorithms. The deep learning networks utilized in this study achieved high performance for detection of IRDs. Application of a multi-input network employing both CFP and IR image inputs improves the overall performance of the model and its diagnostic accuracy.

Authors

  • Freshteh Jafarbeglou
    School of Mechanical Engineering, College of Engineering, University of Tehran, Tehran, Iran.
  • Hamid Ahmadieh
    Ophthalmic Research Center, Research Institute for Ophthalmology and Vision Science, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
  • Farnaz Soleimani
    School of Mechanical Engineering, College of Engineering, University of Tehran, Tehran, Iran.
  • Ali Karimi
    Department of Pharmaceutics, School of Pharmacy, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
  • Narsis Daftarian
    Experimental Medicine, Department of Medicine, The University of British Columbia Faculty of Medicine, Vancouver, British Columbia, Canada.
  • Sahba Fekri
    Ophthalmic Research Center, Research Institute for Ophthalmology and Vision Science, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
  • Tahmineh Motevasseli
    Ophthalmic Research Center, Research Institute for Ophthalmology and Vision Science, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
  • Morteza Naderan
    Ophthalmic Research Center, Research Institute for Ophthalmology and Vision Science, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
  • Babak Kamali Doust Azad
    School of Electrical and Computer Engineering, University of Tehran, Tehran, Iran.
  • Abbas Sheikhtaheri
    Health Management and Economics Research Center, Department of Health Information Management, School of Health Management and Information Sciences, Iran University of Medical Sciences, Tehran, Islamic Republic of Iran. Electronic address: sheikhtaheri.a@iums.ac.ir.
  • Farid Khorrami
    Department of Health Information Technology, Hormozgan University of Medical Sciences, Bandar Abbas, Iran.
  • Hemn Baghban Jaldian
    Departments of Optometry, School of Rehabilitation, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
  • Kia Bayat
    Ocular Tissue Engineering Research Center, Research Institute for Ophthalmology and Vision Science, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
  • Saeideh Shahbazi
    Departments of Optometry, School of Rehabilitation, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
  • Mahdi Yazdanpanah
    Amirkabir University of Technology, Tehran, Iran.
  • Tahereh Sabbaghi
    Department of Information Technology, University of Tarbiat Modares, Tehran, Iran.
  • Kourosh Sheibani
    Basir Eye Health Research Center, Iran University of Medical Sciences, Tehran, Iran.
  • Hadi Ghattan Kashani
    Applied Artificial Intelligence Laboratory, University of Tehran, Tehran, Iran.
  • Masoud Shariat Panahi
    School of Mechanical Engineering, College of Engineering, University of Tehran, Tehran, Iran.
  • Hamideh Sabbaghi
    Departments of Optometry, School of Rehabilitation, Shahid Beheshti University of Medical Sciences, Tehran, Iran. sabbaghi.opt@gmail.com.