Rapid Fluorescence Lifetime Imaging through One-Dimensional Deep Learning Optimization.

Journal: Analytical chemistry
Published Date:

Abstract

Traditional fluorescence lifetime imaging (FLIM) provides valuable quantitative insights for biomedical and molecular biology research, but often relies on computationally intensive datafitting methods to extract meaningful metrics. To address this limitation, we propose a hardware-efficient deep learning approach using one-dimensional channel attention convolutional neural networks (1D CANNs) to process FLIM data with high efficiency and speed. The 1D CANN offers several advantages, including reduced computational requirements, the ability to train on smaller datasets, and minimal training times. The superior performance of 1D CANNs in fluorescence lifetime fitting has been validated by using raw time-correlated single-photon counting (TCSPC) data. By utilizing an experimental training dataset, we achieved strong consistency between the predicted lifetime maps of dynamic fluorescence imaging and the ground truth. Moreover, we extended the application of 1D CANNs to phosphorescence lifetime imaging (PLIM), achieving a prediction error within 10%. Beyond fluorescence lifetime fitting, we demonstrated the versatility of 1D CANNs by integrating them with FLIRR (Fluorescence-Lifetime Redox Ratio) to diagnose Alzheimer's disease in mouse brain slices. Additionally, we applied 1D CANNs to STED-FLIM imaging, achieving improved spatial resolution. Our findings highlight the broad potential of 1D CANNs in biomedical and photonics applications, demonstrating their robustness across varying photon count conditions.

Authors

  • Xinwei Gao
    State Key Laboratory of Radio Frequency Heterogeneous Integration (Shenzhen University); College of Physics and Optoelectronic Engineering, Key Laboratory of Optoelectronic Devices and Systems of Ministry of Education and Guangdong Province Shenzhen University, Shenzhen 518060, P. R. China.
  • Yanfeng Liu
    Key Laboratory of Carbohydrate Chemistry and Biotechnology, Ministry of Education, Jiangnan University, Wuxi 214122, China; Science Center for Future Foods, Ministry of Education, Jiangnan University, Wuxi 214122, China.
  • Yong Guo
    Department of Urology, The First Hospital of Shijiazhuang, Shijiazhuang 050011, China.
  • Luwei Wang
    Department of Electrical and Computer Engineering, National University of Singapore, Singapore, 117576, Singapore.
  • Yinru Zhu
    State Key Laboratory of Radio Frequency Heterogeneous Integration (Shenzhen University); College of Physics and Optoelectronic Engineering, Key Laboratory of Optoelectronic Devices and Systems of Ministry of Education and Guangdong Province Shenzhen University, Shenzhen 518060, P. R. China.
  • Lukui Xu
    State Key Laboratory of Radio Frequency Heterogeneous Integration (Shenzhen University); College of Physics and Optoelectronic Engineering, Key Laboratory of Optoelectronic Devices and Systems of Ministry of Education and Guangdong Province Shenzhen University, Shenzhen 518060, P. R. China.
  • Xiaoyu Weng
    State Key Laboratory of Radio Frequency Heterogeneous Integration (Shenzhen University); College of Physics and Optoelectronic Engineering, Key Laboratory of Optoelectronic Devices and Systems of Ministry of Education and Guangdong Province Shenzhen University, Shenzhen 518060, P. R. China.
  • Wei Yan
    State & Local Joint Engineering Research Center of Green Pesticide Invention and Application, College of Plant Protection, Nanjing Agricultural University, Nanjing 210095, China. Electronic address: yanwei@njau.edu.cn.
  • Liwei Liu
    Shenzhen Key Laboratory of Ultrafast Laser Micro/Nano Manufacturing, Key Laboratory of Optoelectronic Devices and Systems of Ministry of Education/Guangdong Province, College of Physics and Optoelectronic Engineering, Shenzhen University, Shenzhen 518060, China.
  • Junle Qu
    Shenzhen Key Laboratory of Ultrafast Laser Micro/Nano Manufacturing, Key Laboratory of Optoelectronic Devices and Systems of Ministry of Education/Guangdong Province, College of Physics and Optoelectronic Engineering, Shenzhen University, Shenzhen 518060, China.