Development of a Web-Enabled SVR-Based Machine Learning Platform and its Application on Modeling Transgene Expression Activity of Aminoglycoside-Derived Polycations.

Journal: Combinatorial chemistry & high throughput screening
PMID:

Abstract

OBJECTIVE: Support Vector Regression (SVR) has become increasingly popular in cheminformatics modeling. As a result, SVR-based machine learning algorithms, including Fuzzy-SVR and Least Square-SVR (LS-SVR) have been developed and applied in various research areas. However, at present, few downloadable packages or public-domain software are available for these algorithms. To address this need, we developed the Support vector regression-based Online Learning Equipment (SOLE) web tool (available at http://reccr.chem.rpi.edu/SOLE/index.html) as an online learning system to support predictive cheminformatics and materials informatics studies.

Authors

  • Zhuo Zhen
    Department of Chemistry and Chemical Biology, Rensselaer Polytechnic Institute, Troy, NY 12180, United States.
  • Thrimoorthy Potta
    Chemical Engineering, Arizona State University, Tempe, AZ 85287-6106, United States.
  • Nicholas A Lanzillo
    Center for Biotechnology and Interdisciplinary Studies, Rensselaer Polytechnic Institute, Troy, NY 12180, United States.
  • Kaushal Rege
    Chemical Engineering, Arizona State University, Tempe, AZ 85287-6106, United States.
  • Curt M Breneman
    School of Science, Rensselaer Polytechnic Institute, 1C05 Jonsson-Rowland Science Center, 110 Eighth Street, Troy, NY 12180, United States.