Modeling polypharmacy side effects with graph convolutional networks.

Journal: Bioinformatics (Oxford, England)
Published Date:

Abstract

MOTIVATION: The use of drug combinations, termed polypharmacy, is common to treat patients with complex diseases or co-existing conditions. However, a major consequence of polypharmacy is a much higher risk of adverse side effects for the patient. Polypharmacy side effects emerge because of drug-drug interactions, in which activity of one drug may change, favorably or unfavorably, if taken with another drug. The knowledge of drug interactions is often limited because these complex relationships are rare, and are usually not observed in relatively small clinical testing. Discovering polypharmacy side effects thus remains an important challenge with significant implications for patient mortality and morbidity.

Authors

  • Marinka Zitnik
    Department of Computer Science, Stanford University.
  • Monica Agrawal
    Department of Computer Science, Stanford University, Stanford, CA, USA.
  • Jure Leskovec
    Department of Computer Science, Stanford University.