Exploiting machine learning for end-to-end drug discovery and development.

Journal: Nature materials
Published Date:

Abstract

A variety of machine learning methods such as naive Bayesian, support vector machines and more recently deep neural networks are demonstrating their utility for drug discovery and development. These leverage the generally bigger datasets created from high-throughput screening data and allow prediction of bioactivities for targets and molecular properties with increased levels of accuracy. We have only just begun to exploit the potential of these techniques but they may already be fundamentally changing the research process for identifying new molecules and/or repurposing old drugs. The integrated application of such machine learning models for end-to-end (E2E) application is broadly relevant and has considerable implications for developing future therapies and their targeting.

Authors

  • Sean Ekins
    Collaborations in Chemistry, 5616 Hilltop Needmore Road, Fuquay-Varina, NC 27526, USA; Collaborative Drug Discovery, 1633 Bayshore Highway, Suite 342, Burlingame, CA 94010, USA; Collaborations Pharmaceuticals, Inc., 5616 Hilltop Needmore Road, Fuquay-Varina, NC 27526, USA; Phoenix Nest, Inc., P.O. Box 150057, Brooklyn, NY 11215, USA; Hereditary Neuropathy Foundation, 401 Park Avenue South, 10th Floor, New York, NY 10016, USA. Electronic address: ekinssean@yahoo.com.
  • Ana C Puhl
    Collaborations Pharmaceuticals, Inc., Raleigh, NC, USA.
  • Kimberley M Zorn
    Collaborations Pharmaceuticals, Inc. , 840 Main Campus Drive, Lab 3510 , Raleigh , North Carolina 27606 , United States.
  • Thomas R Lane
    Collaborations Pharmaceuticals, Inc. , Main Campus Drive, Lab 3510 , Raleigh , North Carolina 27606 , United States.
  • Daniel P Russo
    Collaborations Pharmaceuticals, Inc. , 840 Main Campus Drive, Lab 3510, Raleigh, North Carolina 27606, United States.
  • Jennifer J Klein
    Collaborations Pharmaceuticals, Inc., Raleigh, NC, USA.
  • Anthony J Hickey
    RTI International, Research Triangle Park, NC, USA.
  • Alex M Clark
    Molecular Materials Informatics, Inc. , 1900 St. Jacques #302, Montreal, Quebec H3J 2S1, Canada.